-
Hi,
First of all let me congratulate you and your team on a terrific resource, it is really user-friendly too. Now for the issue - I have been trying to run a couple of enrichment analyses of bed fil…
-
I have a list of metabolites, In the form of metabolite names, and also in the form of KEGG Ids. How can i run enrichment analysis on this data ? Please advise
Example data:
```
name keggid
Pyru…
-
**Is your feature request related to a problem? Please describe.**
I want to use omicverse to do Different Expression Analysis, but the species I studied is potato, in R language I made my own orgDB …
-
I am attempting to replicate the results from ShinyGo, but for a specific gene set pathway. I am interested in mmu05012, parkinsons disease, and I have 266 genes correlated with it. I want to check wh…
-
**Describe the bug**
I'm working with "stringified" (stringApp v2.1.1) networks.
Since at least this week, everytime I submit a list of gene names selected in Cytoscape 3.10.2 via Tools > Enrichm…
-
Hi! I have been trying to use DecipherSeq for analyzing my NMF results. However, I have encountered difficulties in annotating the themes of the modules. My modules seem to encompass a wide range …
-
inspiration: Stein Aerts class
-
**Is your feature request related to a problem? Please describe.**
As it stands, the pipeline creates a boolean indication of functional markers for each cell to be used in the now removed pairwise e…
-
helper script to map features to genomic regions as BED files (code exists)
Add all mentioned helper scripts to the respective recipes and link from the main repository to the recipe so it’s always i…
-
Via link to an external website, top 500 genes passed via URL.