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**Using COBREXA.jl❓**
Will this repo utilize https://lcsb-biocore.github.io/COBREXA.jl/stable/ for flux balance analysis?
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Hi Daniel,
I'm calculating MIP and MRO based on MAGs assembled from different samples using SMETANA. The number of MAGs assembled varies between each metagenomic sample. Can I compare MIP and MR…
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I was contacted about this by our local iGEM team and will use it as a test case to study how to find datasets, as per #1046 .
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**Format name:** SBML-DFBA
**Short description:** SBML-DFBA is a schema for encoding dynamic flux balance analysis models into SBML, SBML-comp, and SBML-fbc
**Parent URI(s):** format_2585
**…
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NGEN is passing data with improper units to Snow-17
## Current behavior
The output from NGEN/Snow-17 remains different from Snow-17-only. It was difficult to debug this problem with real data so I…
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For the same data, when I work with a smaller number of cells (1000), it works fine. But when I'm working with a lot more cells (>50000),The flux and balance files are NA.Why is that?
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Dear Professor O'Brien,
I am interested in the planned addition of kinetic inductors to JosephsonCircuits.jl. In the readme of the repository this is indicated as a future development goal and I wo…
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Notes that will come in handy when trying to use MATLAB, Colab, etc. when pertaining to FBAs and GEMs
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Dear Professor McClure, I'am trying to test your code for imbitition simulation on a simple artificial porous medium sample (basically just a regular array of vertical solid columns), and noticed a st…
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In GitLab by @mkovari on Dec 18, 2020, 12:14
[The role of particle, energy and momentum losses in 1D simulations of divertor detachment](https://iopscience.iop.org/article/10.1088/1361-6587/ab1321/me…