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### Description
in the following table definition, the comma of 3 lines:
is_ffpe text NULL -- is_ffpe; Indicator to signify whether or not the tissue sample was fixed in formalin and embedded i…
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We need a list of BCOs that can fulfill two main functions:
- [ ] Exemplar BCOs referenced in publications
- [ ] BCOs that have important features for testing to be included in the example DB
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Hi, thanks for this wonderful work!It is mentioned in the manuscript that the BRS classifier was applied to external datasets such as TCGA BLCA. Is it possible to share the BRS classification results …
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**Title:** Automatically label medical data from diagnosis reports
**Project Lead:** Frank Langbein, frank@langbein.org
**Description:** We wish to automatically label medical diagnosis data (MRI,…
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Dear Marvin,
I would like to use your tcga_segmentation tool for tumor tissue prediction of primary breast cancer. I have finished the preprocessing step without any issues. I used the following co…
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When I come to the website, it says: “All slide and diagnostic images from the TCGA program are currently unavailable for download”. Could you share the lung datasets by using a Google Cloud link? : )…
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Some examples here: https://arax.ncats.io/beta/?r=36527
example edge attribute list containing the attribute of interest:
```
--
attribute_type_id: | biolink:aggregator_knowledge_source
value_t…
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Has consideration been given to renaming TCGAbiolinks to GDCbiolinks? Soon, the GDC Portal will have many more datasets than just TCGA and TARGET, so TCGAbiolinks won't adequately describe its functio…
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It looks like all IGH fusions are missed. IGH fusions are for example found in lymphoblastic leukemias.
For example, the IGH-DUX4 fusion is missed in NALM-6 cell line (using this RNA-seq data from…
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When IDs contain characters that are not valid selectors (e.g. spaces, slash), zoom breaks
This should be solvable if the id is put on a `data-id` field, so this should work `[data-id="id/2#$#@$"]`…