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I use the following spec to drag a chromosome band plot for the whole genome. Only chr19 was drawn as two separate parts. It's a bit weird.
```
{
"arrangement": "vertical",
"title": "Large R…
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Hi!
I'm still working with hicexplorer and i have questions about plot. I can't succeed to plot nice and clean plot. I don't know if it's because i didn't produce nice matrix or if i'm not using pr…
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Was browsing sequences in Korea and found something insteresting:
**Proposed new lineage 1**
Currently classified as B.1.619
**Countries circulating**: Korea (12 sequences)
**Earliest sequence**…
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Hi @d-cameron.
Thanks for your software. I got now a vcf file but it's difficult to interpret when you have only breakpoints.
I have used the `StructuralVariantAnnotation` package and the code…
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Hi, could you tell us how to infer the type of SV such as deletion, duplication,inversion, translocation etc. according to the vcf file?
Thank you very much.
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Hi, @tanghaibao and @tangerzhang ,
my scaffolds have many misjoins, i konw you have much experience in processing HiC data. is there any suggestions to perform error correct before running Allhic?…