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Problem: I am currently trying to install h5py 3.11.0 from source. I have HDF5-1.14.4-3 that has also been compiled from source on my CentOS 8 machine. h5py installs fine, but upon importing h5py in m…
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_I'm using gui V1 on windows 11. Used paste MS runs from clipboard._ to submit the raw file.
> Error coming:
Converting raw files to mza format...
Processing file: D:\GBC_2023\mzML\GBC_S2.mzML
P…
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h5py via pip now installs its own hdf5 library, which is a different version than what spack installs. Do both installs via spack to keep them unified.
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I am trying to use h5py in AWS Lambda. I tried installing h5py (and a few other libraries) into a virtual environment, zipping the python folder, and installing the zip folder in a Lambda Layer. The o…
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Probably: we should be reading a monitor via the sparse file anyway.
"""
---------------------------------------------------------------------------
KeyError Tr…
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Without scipy installed, if you `pip install ultranest` and then try and import it, it fails since `ultranest/hotstart.py` is imported (via the `__init__.py` and then `ultranest/integrator.py`) and th…
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To assist reproducing bugs, please include the following:
* Operating System 22.04.4 LTS
* Python version 3.10.12
* Where Python was acquired system
* h5py version N/A
* HDF5 version N/A
*…
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Unexpected failing examples:
../../examples/02_Analysis/plot_04_reference_spectra.py failed leaving traceback:
Traceback (most recent call last):
File "/github/workspace/examples/…
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When running a simulation with Nest, using MPI, one of the cores fails to get access to the h5 file.
Command used:
```bash
mpirun -n 6 bsb -v=4 simulate cerebellum.hdf5 basal_activity
```
Stac…
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Hi~
When I set num_worker to a number greater than 0, the following error will appear. How to solve this problem? I know that num_worker=0 can run, but I want to further improve the running speed. Th…