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I'm seeking the source data for the Gene Ontology (Biological Process) in hetio for 2015. According to this [manuscript](https://git.dhimmel.com/rephetio-manuscript/), hetio contains 559,504 annotatio…
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Hetionet (Biomedical Hetnet)
https://het.io/
Data: https://github.com/hetio/hetionet
Possible license: https://github.com/hetio/hetionet#license
Note that the licensing seems to be a work in p…
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This is probably not the right repository, so feel free to move it to whatever is appropriate.
I enjoyed reading [this preprint](https://openreview.net/forum?id=BkeCW-q6aQ), which I'm assuming @vel…
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For `map_str_edges`, I think it will work with edges containing nodes as objects other than strings. Should we make this more clear in its name and docstring. Something like `compress_edges_with_int_i…
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Hello Daniel,
I am in the process of creating auto-update scripts for all the nodes with hetio, and in order to do that, I will need a copy of the most up-to-date modzs.gctx file. I know that GSEA …
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Following #82 (scibite) and #90 (scigraph), we should investigate whether there are other API endpoints of interest at http://automat.renci.org/. The current list includes:
* chem_normalization
*…
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This looks very similar to what has already been done by https://github.com/hetio/hetionet. Would you please add documentation explaining how this is different? Did you try using hetionet for this tas…
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### Describe the bug
When I want to import Hetionet in PyKeen, there is a 404 error as the target URL in the source code is not functioning. Please check and update the function of Hetionet().
S…
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Hello Sergio and Daniel,
My students and I came across your drug repurposing paper as we were putting a manuscript on a similar topic as a part of the [NIH NCATS Translator project](https://ncats.n…
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Delete or move some registrations to a "deprecated" branch.
Some registrations/folders are from previous phases of Translator and may not be needed.
registered/previously-updated by Su/Wu lab:
…