biothings biothings_explorer_archived issues

biothings / biothings_explorer_archived

BioThings Explorer: a schema-based client for API interoperability

Apache License 2.0

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issues

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Deploy TRAPI 1.3

#186 capasfield closed 1 year ago
1
Use_BTE_TRAPI_v1.1_python_library

#185 Carolina1396 opened 2 years ago
0
Bug: TRAPI to dataframe is not working

#184 andrewsu opened 3 years ago
1
Fixes to use BTE TRAPI js tool

#183 colleenXu opened 3 years ago
0
Update requirements nest_asyncio -> nest-asyncio

#182 colleenXu closed 2 years ago
0
"name:something" returned as identifier for pathway

#181 cbizon closed 3 years ago
5
NCBIGENE works, NCBIGene does not

#180 cbizon closed 3 years ago
2
docs: :memo: add documentation for how to use TRAPI endpoint

#179 kevinxin90 closed 3 years ago
0
Allow query BTE TRAPI endpoint through Python Client

#178 kevinxin90 closed 3 years ago
0
Consistency issue with predicates.

#177 MarkDWilliams closed 3 years ago
1
mygene using association as predicate

#176 cbizon closed 3 years ago
6
How do I retrieve ChEBI Name ?

#175 Carolina1396 closed 3 years ago
1
Fix mygene.info data integrity test

#174 kevinxin90 closed 3 years ago
0
Data Integrity test for MyGene.info fails.

#173 kevinxin90 closed 3 years ago
0
Fix metakg failed to load issue

#172 kevinxin90 closed 3 years ago
1
Fix metakg failure due to code breaking change in SmartAPI

#171 kevinxin90 closed 3 years ago
0
Breast cancer repurposing use case from clinical WG

#170 andrewsu opened 3 years ago
2
update TRAPI export to v1.0 standard

#169 andrewsu opened 3 years ago
0
docs: :memo: add pypi badge to readme

#168 kevinxin90 closed 3 years ago
0
update github actions release process

#167 kevinxin90 closed 3 years ago
0
Project Description Missing From PYPI landing page for BTE

#166 kevinxin90 closed 3 years ago
1
Enable TRAPI input to python client

#165 andrewsu opened 3 years ago
0
BTE Potentially erroneously considering queries invalid

#164 MarkDWilliams closed 3 years ago
2
Use case: Drug repurposing for ADCY5

#163 andrewsu opened 3 years ago
6
MetaKG: support parsing predicates from KGX KP based on x-kgx extensions

#162 newgene opened 3 years ago
0
MetaKG: support parsing predicates from TRAPI API based on x-trapi extensions

#161 newgene opened 3 years ago
0
breast cancer repurposing use case

#160 andrewsu closed 3 years ago
1
update documentation at https://github.com/NCATSTranslator/NCATSTranslator.github.io/wiki/Translator-Standards-overview

#159 andrewsu opened 3 years ago
0
Fix issue 155

#158 kevinxin90 closed 3 years ago
0
Integrate codacy to GitHub actions

#157 kevinxin90 closed 3 years ago
0
Integrate Codacy with Github Actions

#156 kevinxin90 closed 3 years ago
1
Run Integrated API test independently of regular BTE unittest

#155 kevinxin90 opened 3 years ago
0
Fix issue 147

#154 kevinxin90 closed 3 years ago
0
Resolve ids refactor

#153 kevinxin90 closed 3 years ago
0
Use Cytoscape network analytics and visualization to address query expansion

#152 andrewsu opened 3 years ago
0
implement filtering/ranking based on PFOCR co-occurrence

#151 andrewsu closed 2 years ago
3
run BTE on MediKanren use cases

#150 andrewsu opened 3 years ago
1
Fix issue 147

#149 kevinxin90 closed 3 years ago
0
Set up auto release using Github Actions

#148 kevinxin90 closed 3 years ago
1
Fix Build Error in CI Test

#147 kevinxin90 closed 3 years ago
1
development of more use cases

#146 andrewsu opened 3 years ago
2
Expansion of DrugMechDB

#145 andrewsu opened 3 years ago
0
Enhance handling of biological evidence, provenance and context

#144 andrewsu opened 3 years ago
0
Enable local query caching

#143 andrewsu opened 3 years ago
0
Support long-running API queries

#142 andrewsu opened 3 years ago
0
Allow specification of secondary parameters

#141 andrewsu opened 3 years ago
0
Enable the use of lists of entities as input to APIs

#140 andrewsu opened 3 years ago
0
Enable batch queries over lists of entities

#139 andrewsu opened 3 years ago
1
Enable reasoning using node/edge hierarchies

#138 andrewsu opened 3 years ago
1
better document /jupyter notebooks/drug_response_predict.ipynb

#137 andrewsu opened 3 years ago
0