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Hi,
I have been using PRANK without any problems for several alignements but for a particular one, PRANK keep crashing with the following error:
```
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PRANK v.140603:
---------------…
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If you give bleualign large input, it will just run forever. It can hold up the pipeline. Would be great if we either find a way to make it perform better for large document pairs, or have an option f…
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### Name:
```Hirschberg's Algorithm```
### About:
This feature introduces Hirschberg's Algorithm, a space-efficient algorithm for solving the Longest Common Subsequence (LCS) problem. Hirsc…
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It's nice to know that the LCS problem can be solved in O(n) space using the algorithm made by Hirschberg.
It's nice to know that quick-select can be done in O(n) worst-case (deterministic).
The…
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1. each aligner batch to take in max memory and max ref/query sizes and determine how many how alignments can be performed in the batch.
2. provide api to check max alignments possible
3. actual max…
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I'm trying to compile GenomeWorks using the lastest CUDA version, and there seem to be some breaking changes in thrust that generates some compilation errors, here are the errors reported when doing `…
quim0 updated
1 month ago
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I am using the latest version in a Windows 11 environment. The first time I tried the program on a test with 100 students it worked fine. For the second test it finds the images and processes them wit…
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Hi,
I'm trying to test ochre on the ICDAR 2017 dataset (English only). I'm not using the workflow but operating ochre myself:
1) I took all the English monographs and periodical and clean it from sp…
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| | |
|--------------------|----|
| Bugzilla Link | [PR4411](https://bugs.llvm.org/show_bug.cgi?id=4411) |
| Status | NEW |
| Importance | P normal |
| R…