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https://twitter.com/Jillc27/status/999377470146142209
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Hi,
Thanks for the great work. I am using DynamicBind to screen 2000 compounds. What result should I used for the ranking of compounds? I have the `affinity` in affinity_prediction.csv, `Iddt `and…
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I encountered something what looks like a bug in cleaning structures after the use of multi-iterator. The question is, should I expect `hts_close(fp)` to auto-destroy the index created with `sam_inde…
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I have the bam files of a tumour sample "T11QM0022" and its matched normal sample "B11QM0022". They were generated using the GATK4 Best Practices pipeline. They are sorted and index. However, when I r…
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I use the commad ""/usr/bin/basevar" -h",but it dosnt work !
return me "undefined symbol: hts_utell"
whole waring:
Traceback (most recent call last):
File "/usr/bin/basevar", line 9, in
…
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I tried to install the SurVirus tools, but the following error occurred when I tried the command "sudo cmake -DCMAKE_BUILD_TYPE=Release . && make":
Installation steps I followed:
1. git clon…
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Hi Brent,
I'm wondering if there is a way to manipulate the header while/before opening an uncompressed VCF file to prevent errors and process the file.
The use case here is that I'd like to use…
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Dear sir,
I met problem in step10
Mapping with Bowtie2 (Langmead and Salzberg 2012, Nat Methods 9(4), 357-9)
Creating reference from contigs
Working with sample 1: A7
Getting raw reads
…
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I am interested in finding chimeric reads and the installation failed.
I have administrative privileges, and I ran the code
git clone https://github.com/rlorigro/Liger2LiGer.git
cd Liger2LiGer
mk…
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Unable to find the relevant network for the Hierarchical Token Semantic Transformer (HTS AT) in the code