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As an sda-admin
I want to be sure that the htsget functionality works as intended
so that I can avoid any bugs that will downgrade the user experience.
A/C:
- integration test(s) that will check tha…
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Hey!
I've stumbled upon this project as we've started using your excellent htsget-rs server implementation :)
Now that we're trying to lazily consume the stream of CRAM/BCF on the client side ([…
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Hello @cmdcolin,
We are deploying JBrowse2 @UMCCR, [primarily for the htsget support](https://github.com/umccr/data-portal-client/pull/88), so that different web-based clients work fine using one d…
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Create endpoints and logic for serving data and metadata HTSGET protocol
https://htsget.ga4gh.org/docs/
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htsget the server/API - is also hosting a webpage with /login endpoints.
Also throw into the mix that an individual might be getting data from two (or more) different releases in Elsa. So whilst we…
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I would like to profile benchmarks running instead of a target bin file directly. What would be a correct CLI syntax for that? I've tried the following unsuccessfully (the output `datafile` is not gen…
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It would be nice to have a flag to `cargo publish` which publishes all local packages in a DAG fashion.
Non-atomic publish was added in #14433, stabilization is being tracked in #10948
Notes (ed…
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The `service-info` endpoint could contain some more data that could be useful for debugging. Specifically, it should probably contain the package and version of the htsget-rs server, e.g. `htsget-acti…
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I am getting 502 errors now from the reference server at https://htsget.ga4gh.org/. This just started happening sometime on Dec 28, causing igv.js htsget unit tests to fail. Example in screenshot…
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Revisit noodles newest changes on noodles-htsget crate and refactor our `htsget-search` accordingly: https://github.com/zaeleus/noodles/commits/master/noodles-htsget