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GMOD
/
bam-js
Parse BAM and BAM index files in javascript for node and the browser
MIT License
20
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9
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Possible memory optimizations
#106
cmdcolin
opened
1 week ago
0
Fix bug with incorrect coverage being rendered in jbrowse
#105
cmdcolin
closed
2 weeks ago
0
Refactor BAM record class to avoid lower casing all tag names
#104
cmdcolin
closed
3 weeks ago
1
Fix BAM header parsing failing on refNames containing a colon
#103
cmdcolin
closed
9 months ago
1
Update to buffer-crc32 1.0.0
#102
kibertoad
closed
9 months ago
2
Update eslint to properly use typescript config
#101
cmdcolin
closed
9 months ago
1
Support for Content-Encoding:gzip(?)
#100
cmdcolin
opened
11 months ago
2
Remove dependency on long package
#99
cmdcolin
closed
3 months ago
0
feat: explicit buffer import
#98
sehilyi
closed
1 year ago
3
Typing issues
#97
tuner
opened
1 year ago
5
Improve typescripting, remove chunkSizeLimit/fetchSizeLimit
#96
cmdcolin
closed
1 year ago
3
Update devDeps, remove object.entries and cross-fetch polyfills, improved typescripting
#95
cmdcolin
closed
1 year ago
3
Bump json5 from 1.0.1 to 1.0.2
#94
dependabot[bot]
closed
1 year ago
2
LocalFile is not a constructor
#93
amijalis
closed
2 years ago
2
Use --module esm for module in package.json
#92
cmdcolin
closed
2 years ago
1
Bump minimist from 1.2.5 to 1.2.6
#91
dependabot[bot]
closed
2 years ago
2
Publish source directory for bam-js for source-map
#90
cmdcolin
closed
2 years ago
2
Restore chunk cache for speed improvements
#89
cmdcolin
closed
2 years ago
2
Proposed optimizations to BAM records
#88
cmdcolin
closed
2 years ago
4
Add blocksForRange to BamFile class to fix issue with refId vs refName confusion
#87
cmdcolin
closed
2 years ago
1
htsget auth support
#86
brainstorm
opened
2 years ago
7
Typescript build with esm module in package.json
#85
cmdcolin
closed
2 years ago
3
fetch size limit error with `pairAcrossChr`
#84
sehilyi
closed
2 years ago
2
Missing end position in read mate?
#83
alexander-veit
closed
3 years ago
2
Bump tmpl from 1.0.4 to 1.0.5
#82
dependabot[bot]
closed
2 years ago
1
Bump ws from 5.2.2 to 5.2.3
#81
dependabot[bot]
closed
3 years ago
1
Fix typo in CHANGELOG.md
#80
sehilyi
closed
3 years ago
1
Bump path-parse from 1.0.6 to 1.0.7
#79
dependabot[bot]
closed
3 years ago
1
need explanation for usage
#78
hth4
closed
3 years ago
5
Bump browserslist from 4.12.0 to 4.16.6
#77
dependabot[bot]
closed
3 years ago
2
Bump hosted-git-info from 2.8.8 to 2.8.9
#76
dependabot[bot]
closed
3 years ago
2
Bump lodash from 4.17.15 to 4.17.21
#75
dependabot[bot]
closed
3 years ago
2
Bump handlebars from 4.7.6 to 4.7.7
#74
dependabot[bot]
closed
3 years ago
2
Bump y18n from 4.0.0 to 4.0.1
#73
dependabot[bot]
closed
3 years ago
2
Yield thread time
#72
cmdcolin
closed
3 years ago
3
Raw qual score accessor function
#71
cmdcolin
closed
3 years ago
1
Add getHeaderText to bamFile
#70
cmdcolin
closed
3 years ago
0
Bump ini from 1.3.5 to 1.3.7
#69
dependabot[bot]
closed
3 years ago
1
Port canMergeBlocks for CSI from the existing use in BAI
#68
cmdcolin
closed
3 years ago
1
Htsget unable to fetch header from some endpoints
#67
cmdcolin
opened
4 years ago
7
Feature sequence is undefined
#66
alexander-veit
closed
4 years ago
2
Fix unsigned vs signed values
#65
cmdcolin
closed
4 years ago
1
Wrong negative number values being reported for some tags
#64
cmdcolin
closed
4 years ago
0
Support CG tag for really long reads
#63
cmdcolin
closed
4 years ago
1
All tags are stored in lower case, but technically lower case tags are distinct from upper case
#62
cmdcolin
closed
3 weeks ago
1
Simplifications of unzip
#61
cmdcolin
closed
3 years ago
1
Htsget data fetching
#60
cmdcolin
closed
4 years ago
3
Bump lodash from 4.17.15 to 4.17.19
#59
dependabot[bot]
closed
3 years ago
2
Large amount of short reads bogs jbrowse down
#58
cmdcolin
opened
4 years ago
1
Bump acorn from 5.7.3 to 5.7.4
#57
dependabot[bot]
closed
4 years ago
1
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