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From the NIH website (https://lincsproject.org/LINCS/tools/workflows/find-the-best-place-to-obtain-the-lincs-l1000-data):
"The LINCS L1000 project has collected gene expression profiles for thousa…
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Hi,
Thanks for your work.
I queried some up and down-regulated genes on sigcom web, there were some results from different data source, and here are two of them:
![image](https://user-images.github…
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### Acknowledgements
- [X] I have searched (https://github.com/aws/aws-sdk/issues?q=is%3Aissue) for past instances of this issue
- [X] I have verified all of my SDK modules are up-to-date (you can pe…
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I download the pre-trained model from https://maayanlab.cloud/sigcom-lincs/#/Download
I found L1000_to_RNAseq_pipeline_training.ipynb said the input is Level 3 of L1000.
I used the DeepCE model…
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When I try to generate codes for version R17x43, the program crashed.
## to Reproduce
1. `$ rmqr foo foo.png --version R17x43`
## error message
```
Traceback (most recent call last):
F…
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I am very interested in your article but i have some questions. I want to know what represents the "'./L1000/shRNA_cgs" in train.py? Thanks
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### The Issue
`new Request('', {method: 'patch'})` unexpectedly throws error 'Invalid HTTP method string: patch' but `new Request('', {method: 'PATCH'})` works fine.
Minimal Reproducible Example: …
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### Problem
It's common to use this "false ternary" syntax in GitHub Actions:
```
${{ env.MY_BOOL = 'true' && 'value-if-true' || 'value-if-false' }}
```
However a note from their docs:
>…
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### MOA Multi-label Classification Predictions
@gway @shntnu
- A compound profile has multiple MOAs i.e. more than one target label (multi-label classification)
- All MOAs found in just on…
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### L1000 vs Cell Painting Comparison based on median correlation values from compound replicates per dose
@gwaygenomics @shntnu
- This is a recap of what I presented about 2 weeks ago dur…