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### Cloud Computing Instance Flavor
g3.xl - GPU instance (32 CPUs, 125 GB RAM and A100 GPU)
### Description
3Dmorphometrics of fossil primate teeth
### ORCID
0009-0008-9203-9987
### Email
U2Fsd…
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### Cloud Computing Instance Flavor
g3.xl - GPU instance (32 CPUs, 125 GB RAM and A100 GPU)
### Description
using alpaca to compare vertebrae
### ORCID
0009-0009-2326-8759
### Email
megvdb4@uw.…
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Dear tischi, it would be very helpful for Xenopus extract folks to have 2D spindle morphometrics as a future option since the way we process our samples essentially flattens the spindles. Thanks!
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Hiya,
I have a 2023 Macbook Pro (M2 pro) Ventura and found that I had to make a slight alteration to the protocol for mac users when adding a library. It is necessary to add the 'set' flag.
cond…
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It would be cool if napari-stress was compatible with [morphometrics](https://github.com/kevinyamauchi/morphometrics). Unfortunately, we have a dependency conflict at the moment.
If morphometrics …
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Some code is legacy, some comments are outdated, some code can be concatenated. This is one of the module that we use the most. Therefore it can be a good idea to refactor it! Some UT might need to be…
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This problem was raised in a discussion with a collaborator. For morphometrics, the perimeter computation can sometimes fail. This is because the algorithm considers every transition from foreground t…
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Hi @kevinyamauchi ,
I detected some code-duplication between regionprops here:
https://github.com/morphometrics/morphometrics/blob/main/src/morphometrics/measure/label.py#L37-L129
and here:
ht…
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### Annotation Modes:
- [x] points
- [x] paths
- [x] spheres
- [x] dipoles
- [ ] surfaces
### Pose Generation:
- [x] points #12
- [ ] paths
- [ ] backbone
- [ ] rings
- […
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## Pre-planning stage
* [x] Attend live Plotly session on the topic
* https://go.plotly.com/dash-image-processing/
* Registration required.
* [ ] Explore examples of similar features already…