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Within #671, it appears that the MIP-images zattrs do not include `wavelength_id` in the `omero` metadata.
Here is how this leads to a cellpose-task error:
```python traceback
TASK ERROR: Task na…
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Found while running our CI pipeline on this module: https://github.com/TheDeanLab/navigate/blob/develop/test/model/data_sources/test_zarr_data_source.py
The tests work with `pydantic-ome-ngff==0.5.…
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Hi Filippo,
I am not sure if you are familiar with **ImageJ/Fiji**.
In case you are, I would share this issue.
I have an ome.tif file that was saved via Fiji's Bio-Formats Exporter: when I drag …
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Is there a way to validate a ome.zarr file with the python library to check if it follows the spec?
I checked the documentation, but could not find a dedicated function for it.
The closest I fou…
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When you use bioformats2raw it produces one or more images at the root:
https://ngff.openmicroscopy.org/0.4/#bf2raw
When I try to open one of these zarrs:
```
from pydantic_ome_ngff.v04.multisca…
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when using nested expandable connectors with 2 levels only, and the nested one is a vector of expandable connectors, I get an internal error.
I provide a case which highlight the issue. They are 2 …
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This question came as a follow-up of the ongoing [OME 2024 challenge](https://github.com/ome/ome2024-ngff-challenge) which aims to generate Zarr datasets largely based on the structure defined in [RFC…
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![OME data model](http://www.openmicroscopy.org/site/support/ome-model/_images/Image-Overview.png)
One may conceive of being able to import and export sets of OME top-level objects (especially projec…
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**Dependency Repos**
- [ ] ome-jai (https://github.com/ome/ome-jai)
- [ ] ome-poi (https://github.com/ome/ome-poi)
- [ ] ome-metakit (https://github.com/ome/ome-metakit)
- [ ] ome-mdbtools (http…
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Hi all,
following up an issue I created [over at ezomero](https://github.com/TheJacksonLaboratory/ezomero/issues/109), I am having some trouble uploading zarr to our omero server.
I created a te…