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Vector/host/pathogen data are layered with environmental information and/or measurement of host body parts, DNA data such as genomics or host/pathogen detection assays, combined vector/host/pathogen d…
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Pathogens/ID/Microbiome options
* PLoS Pathogens
* Cell Host & Microbe
* [Infection & Immunity](http://iai.asm.org/)
* [BMC Microbiology](https://bmcmicrobiol.biomedcentral.com/)
* [Pathogens and…
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The page [Human pathogen genomics](https://rdmkit.elixir-europe.org/human_pathogen_genomics) was created. @elixir-europe/fair-cookbook-editors please check for possible connections with FAIRCookbook r…
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For annotation of the Eukaryotic Pathogen Genomics Resource (EuPath) database, we request following new specimen terms:
bronchial wash specimen
bronchoalveolar lavage fluid specimen
lung aspi…
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- **Organizational Page**: [Pathogens](https://github.com/NCEAS/open-science-codefest/wiki/Pathogens)
- Proposer: Bill Mills
- Field: Genomics (particularly WRT to pathogens)
- Computing: Python
- Lo…
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**What topic do you wish to add?**
A domain overview page discussing general data management considerations regarding sequencing is currently missing.
Some of this is presently reported in "marine …
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Hello, Pathoscope developers! @kacrandall @ecastron @mlbendall @rgranit
I am trying to use your tool for pathogen detection and I have a few questions regarding the usage:
what I understood from re…
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When a group wants to include their pipeline in PHA4GE, they must create a PR requesting the review of their pipeline by the working group. For these PRs there will be a checklist template where the g…
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Hi,
I am trying to install circlator on our HPC cluster. I am trying to use Singularity and convert the docker image, but I ran into an issue that I have been able to reproduce with the docker ima…
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