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[in the library](https://library.vcvrack.com/Cella/TwinPeaks)
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The threshold feature that is implemented in the following line requires the `lenspack` package, which is not in conda, and must be installed via `pip`. For ease of use with package installs, I will c…
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Very strange behavior. I have four ATAC-seq samples across two experimental conditions (two each). For three of the samples, Genrich identifies ~10-30k peaks, but for the other one, it identifies 0. H…
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Hi
This might be something I'm doing wrong rather than a bug, but I thought I'd check
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95: pks = y[locs]
```
**find_peaks** returns peak indexes relative to the beginning of _input_ array, in your case `y[i:]`, so to get peak indexes of the …
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Hello!
I am trying to run your package on my own ATAC-seq dataset. Although I set `ref_genome = 'hg38'` in `EpiTraceAge_Convergence`, I still got a message of `Input peakset is set to be hg19`. In …
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QSI recon/DSIstudio autotrack won't run successfully. I encountered a 'FileNotFoundError' during QSIRecon processing, specifically when trying to generate the peaks_mosaic.png file in the plot_peaks n…
aazor updated
2 weeks ago
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Hi, I am analyzing EDA peak count using neurokit 2 library. But I measured EDA using shimmer device, so skin conductance range level is different from what neurokit2 expects(1.5~0.2µs), so I think the…
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**Is your feature request related to a problem? Please describe.**
CNN peak finding find peaks (and bounding boxes) in each tube independently.
On WISH peaks often span ~3-5 tubes to there will be d…