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While working on test data, I found that when `fcqs` is run on the real data from the Dropbox, it results in complex eigenvalues in `rigpower`, resulting in an error in `eval`.
This is the code I r…
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I am a researcher in plant genetics, currently endeavoring to understand the correlation between specific loci and phenotypic traits in plants. In my research, I have collected data on a series of loc…
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Is there any way to delete these stocks outside of https://github.com/solgenomics/sgn/blob/master/bin/delete_stocks.pl ? I assume if I delete plants any phenotypic data or tissue ids associated with t…
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Create a standalone page for phenotypic data, with the intent to describe the experiment and provide the non-omic data.
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On /breeders/trial/, will this delete images?
![image](https://github.com/user-attachments/assets/13d16733-3ab7-421f-b399-0ee8abf3d52c)
If not, how do I purge associated images? It seems like i…
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BrAPI manage phenotypic data well on the single observation level (e.g. single measurements on one plot). In the breeding process, be means of a statistical analysis, most often a ANOVA (Analysis of v…
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### Description
In the requirements for the phenotypic TSV, we should explicitly mention that missing values are not allowed in columns annotated as being about participant or session IDs. This is im…
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We keep encountering TSVs that have a participant ID column without the `sub-` prefix required for BIDS subdirectories.
This makes sense, as most likely the phenotypic/tabular data will have preceded…
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┆Issue is synchronized with this [Jira Task](https://ucsc-cgl.atlassian.net/browse/ANVIL-298)
┆Issue Type: Task
┆containerName: AnVIL
┆Issue Number: ANVIL-298
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Need to look whether it's possible to automatically download this data from S3 and plug it into afqi analysis.