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I am adding .cine capability to pims (Python Image Sequence) by @tcaswell
https://github.com/soft-matter/pims
using python-cine. This will give it more features and a uniform interface to other types…
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## Issue
I use the imread function to load nd2 files recorded on Nikon microscopes that contain multiple series (i.e. multiple fields of view are imaged simultaneously) and multiple color channels as…
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Hey, been having an issue getting this to import properly, here's the main error section, I can get more if you want to see higher up the chain:
```
Collecting matplotlib==3.7.1 (from deforum==0.…
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PIMS Bioformats has compatibility with nd2 files AND czi files. Refer to note [in the PIMS source](https://github.com/soft-matter/pims/blob/5bbe33376d0fdd15318af65c591d66608e8e7a1e/pims/api.py#L111) t…
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Python 3.12.4
trackpy 0.6.4
The following runs without error:
`f = tp.batch(frames, 11, invert=False, minmass=500, processes=1)`
whereas processes = 2 gives a long error message ultimately en…
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Several of the example notebooks (most notably, the basic walkthrough) use pims ImageSequence objects to load images. Several use the `as_grey` parameter, which was removed in [this pims commit](https…
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Hi,
I've noticed there is a broken link as part of the Geo-spatial Real Estate Inventory System open opportunity. Team Questions > Question 3 > PIMS on GitHub.
Can you please update the link?
…
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Hi,
I am using PIMS for some image processing and I would like to enhance the contrast in my figures.
With PIL, I would use the ImageEnhance.Contrast() function, but I could not find an equivalent…
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cc: @jmdelahanty
Hi dask-image developers!
Normally an end-user may control which reader `pims.open()` uses to load images by simply increasing the `.class_priority` attribute of their preferred…
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```
If I import PIMS data and projects are already in the registry with a
description, the description is not updated. This may be true for other
fields but I did not check.
(Due to this the latest…