-
Hi Matin,
when I run `bgcflow build report` on the Lactobacillus_delbrueckii example dataset, I get this error for the generation of the eggNOG-Roary markdown:
`Error in rule mkdocs_py_report:
…
-
Currently, we are experiencing extreme overrepresentation of Hypendymal cells after running InSituType.
It seems to be the go-to celltype when the data is shallow. Although the data has passed QC me…
-
we get reports every now and then that there are some prokaryotic sized cells visually but they also have the nucleus. So there is some rare condition that causes the visual scale to not apply correct…
-
Divid and conquer pipeline giving empty error, cells.X is float32
%%time
with mc.ut.progress_bar():
mc.pl.divide_and_conquer_pipeline(cells, random_seed=123456)
Detect rare gene modules…
-
I’m currently running NLLoc to relocate seismic activity on a small volcanic island (30 Km X 20Km) with the following settings:
```
VGGRID 2 121 60 0.0 0.0 -1.0 1.0 1.0 1.0
```
```
LOCHYPO…
-
The density map generated with skymapper does not seem to follow the resolution set by the `nside` parameter with `healpy`.
I run the following code with `nside=32` (resolution of 110 arcmin) and `…
-
[CellCNN](https://www.nature.com/articles/ncomms14825) is a powerful new technique to discover rare cell populations that correlate with outcomes variables (eg., Response). It would be powerful to inc…
-
Hi @haowenz,
I tend to not force use of the 10X barcode include-list since it is possible there could be valuable information/real cells, but I noticed that some scATACseq data processed via `chromap…
-
**Describe the bug**
In very rare circumstances, the NSCBC outflow boundary conditions can produce states in isolated cells at the boundary that have unphysically high velocities. An ad hoc (but part…
-
`nicematrix` use of names of the cells to play with TikZ for (even if this fine-tunings is used in some rare situations).
This could be a feature proposed only when using `\UseTblrLibrary{tikz}`.