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HMC is a bit slow for the Ebola vignette models:
```r
> rstan::get_elapsed_time(fit$fit)
warmup sample
chain:1 18.386 8.755
chain:2 17.760 8.716
chain:3 17.357 8.797
chain:4 19.231…
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> I think make a new issue for handling this with my preference being to stop being opinionated about the backend in the core package. We can talk about doing so (and how to) in the vignettes. The min…
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Seems like rstan installation is not typical, I had to follow these instructions https://github.com/stan-dev/rstan/wiki/RStan-Getting-Started#how-to-install-rstan to install it.
perhaps include thes…
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For the rstan object
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Hello, I am very interested in using this technique to compare a set of time-series models. However, my models are written directly in stan and I interface with them through `rstan`.
I have been w…
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I haven't been able to get the Stan code to work yet. I've saved it as a .stan but it keeps outputting an error when I run it:
```
`Error in new_CppObject_xp(fields$.module, fields$.pointer, ...) : …
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Please place an "x" in all the boxes that apply
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- [ ] I have the most recent version of linelist and R
- [x] I have found a bug
- [x] I have a [r…
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See https://github.com/nlmixr2/nlmixr2/issues/253.
Rstan sets some environement variables: `PKG_CPPFLAGS`, `PKG_LIBS` and `USE_CXX17`. These variables interfere with other R packages using `R CMD S…
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I have a package, mrbayes, which uses Stan through the rstan package.
I find on macOS on the GitHub actions runners that `R CMD check` fails if it uses the binary version of rstan from CRAN. All 4 …
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The rstan package is finally doing the right thing and not listing the ggplot2 package in the Depends field of its DESCRIPTION, but this has had the unfortunate minor side effect of breaking the ggfan…