epiverse-trace serofoi issues

epiverse-trace / serofoi

Estimates the Force-of-Infection of a given pathogen from population based sero-prevalence studies

https://epiverse-trace.github.io/serofoi/

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issues

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Add unit test for `fit_seromodel()`

#213 ntorresd opened 10 hours ago
0
Adding VPH use case to Use Cases article

#212 ntorresd opened 10 hours ago
0
New `fit_seromodel()` unit test

#211 ntorresd opened 11 hours ago
0
Unit testing is missing for main functionalities of the package

#210 ntorresd opened 11 hours ago
0
(i208)fix: correct time indexation in time-log-foi model

#209 ntorresd closed 4 days ago
1
Misspecification of time indexation in log-scale time-varying Stan model

#208 ntorresd closed 4 days ago
1
Dev

#207 ntorresd opened 5 days ago
0
Adding structure to `foi_index` in `fit_seromodel`

#206 ntorresd opened 1 week ago
0
Add an article about fitting models with seroreversion

#205 ntorresd opened 1 week ago
0
Improve Documentation: Use `get_foi_index()` Instead of Manual `rep(...)` for `foi_index` in `fit_seromodel` Examples

#204 JDConejeros opened 2 weeks ago
1
Divergent Transitions in fit_seromodel

#203 JDConejeros closed 2 weeks ago
1
Add options to `plot_seromodel`

#202 zmcucunuba opened 2 weeks ago
2
Set default behaviour for sampling initialization

#201 ntorresd opened 1 month ago
0
Full refactorization of modelling and visualisation functions

#200 ntorresd closed 1 week ago
9
Simulation functions and vignette plus other things

#199 ben18785 closed 1 month ago
6
Update `CITATION.cff`

#198 github-actions[bot] closed 1 month ago
0
Polish DESCRIPTION

#197 Bisaloo closed 2 months ago
0
Copy update-citation-cff fix from packagetemplate

#196 Bisaloo closed 2 months ago
0
Silent test failure on CI

#195 Bisaloo opened 3 months ago
0
Update test coverage workflow to allow use of global codecov token

#194 ntorresd closed 1 month ago
2
Priors functions

#193 zmcucunuba closed 6 days ago
5
zero foi truncated for some ages or years based on epi knowledge

#192 zmcucunuba closed 4 months ago
1
refactor prepare_serodata

#191 zmcucunuba closed 6 days ago
3
Restructuring inference methods

#190 ben18785 opened 4 months ago
2
add fit_seromodel_optimization function

#189 rccreswell opened 4 months ago
0
Dev av normal serorev

#188 ntorresd closed 1 month ago
0
Add age-varying normal model and change prior parameters specification

#187 ntorresd closed 4 months ago
0
Dev version

#186 ntorresd closed 5 days ago
1
Change convergence threshold to rhat<1.01

#185 ntorresd closed 4 months ago
0
Use data simulation functions in vignettes instead of `data(simdata_*)`

#184 ntorresd closed 4 months ago
0
Minor spelling corrections and WORDLIST update

#183 ntorresd closed 4 months ago
0
Remove simdata

#182 ntorresd closed 4 months ago
0
Update bug report

#181 davidsantiagoquevedo closed 4 months ago
0
export `group_sim_data`

#180 ntorresd closed 4 months ago
0
Change minimum required version of rstan

#179 davidsantiagoquevedo opened 4 months ago
6
Add NEWS.md

#178 ntorresd closed 4 months ago
0
Test av models

#177 ntorresd closed 3 months ago
0
Deprecate `run_seromodel`

#176 ntorresd closed 4 months ago
0
update contributors list in README

#175 ntorresd closed 4 months ago
0
Look into alternatives to Hmisc

#174 Bisaloo opened 4 months ago
0
Explicitly specify bootstrap version

#173 ntorresd closed 5 months ago
0
chore: update README.md with the initiative

#172 GeraldineGomez closed 5 months ago
0
Upgrade time-varying models using chunks and specifying prior parameters

#171 ntorresd closed 4 months ago
0
Write function for running optimization

#170 rccreswell closed 4 months ago
2
Changes to `generate_sim_data`

#169 ben18785 closed 1 month ago
2
Refactor sim functions

#168 jpavlich closed 5 months ago
2
Creating functionality for time and age varying model.

#167 sumalibajaj opened 6 months ago
1
Fix veev2012 duplicated data

#166 GeraldineGomez closed 6 months ago
1
Fixes issue#112

#165 ekamau closed 1 month ago
1
Corrects documentation syntax across the package

#164 ntorresd closed 6 months ago
1