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Hello, congratulations! Could you provide me with the processed ATAC data? I'm very interesting in your multi-omics single cell data. Thank you very much!
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Spotted by @olisand
https://tess.elixir-europe.org/events/4th-workshop-single-cell-sincellte-2022-single-cell-transcriptomics-spatial-and-multi-omics
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I frequently work with single-cell multi-omics data (mostly scRNA-seq + CITE-seq, but scATAC-seq is also expected), and it is known that different modalities for the same samples requires separate seq…
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It was with great interest that I read your recent publication in Nature Methods titled "scGPT: toward building a foundation model for single-cell multi-omics using generative AI" . I found your work …
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@iramirezpardo @123anjuan Hello,
I saw "patient_id_sample" in the code below you. May I ask if "patient_id_sample" is the sample information (such as when I sequenced and measured 6 samples, 3 b…
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In this session, we will discuss potential projects to improve the _R/Bioconductor_ infrastructure for the analysis of large single-cell 'omics data sets. Projects can focus on any stage of the pr…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/JEFworks-Lab/SEraster
Confirm the following by ed…
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I propose a new UBKG model to address three separate requests.
# Requests
1. The UBKG should be the source of truth for the assay metadata currently managed in the value object of the soft assay t…
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Hi,
I found the list missed some recent papers:
>[Multimodal Integration] [2022 Nature Biotechnology] Multi-omics single-cell data integration and regulatory inference with graph-linked embedding
…
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Dear authors,
Hi, all! Thank you so much sharing great tool to community.
I happen to come across you used DLPFC 10x visium data on CytoCommunity as well but can't find any toy example how you con…