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Dear authors/maintainers,
First off, thank you for developing and maintaining this wonderful tool! Your efforts are much appreciated.
I would like to inquire about an issue I am facing. Specifi…
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**Submitter Name and ORCiD**
[Holly M. Andrews](https://orcid.org/0000-0002-5173-0826)
**Submission ID**
53da7915-3809-48bd-92b9-42a793b92aaa
**Have data already been generated for your study?…
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**Submitter Name and ORCiD**
Amy Zimmerman
**Submission ID**
1d87912e-9c22-4717-acf3-483a9335e770
**Have data already been generated for your study?**
No
**PI Name and ORCiD**
Amy Zimmerm…
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Hi,
I individually assembled 30 metagenomic soil samples collected from different sites cross the country. Is it reasonable to mapping all samples to a specific assembly to calculate coverage depths …
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Based on review of YAML files in https://github.com/microbiomedata/nmdc-schema/tree/main/src/schema, these slots were identified as conditionally required:
```
jgi_metagenomics.yaml
dna_cont_well…
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There are submissions in the dev portal with a `status` value of "complete" but would not pass basic validation. For example, they are missing a `sample name`
- 456a82a2-8832-4669-b1a1-7b8fd4a11…
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Hello, I'm interested in downloading metagenomic assemblies from MGNify in a programmatic manner. We've been testing out your API, but there seem to be inconsistent file naming patterns that make it d…
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After you comment in the FindFungi repo I looked at your repo's. Interesting work!
Are you working on a web interface for snakemake? For metagenomics data?
What is the relation with the mgms repo?
…
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possible dupe issue from another repo?
```yaml
problematic_env_broad_scale_term_ids:
- label: meadow ecosystem
term: ENVO:00000108
- label: agriculture
term: ENVO:01001442
problematic_env…
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- **acted_on_behalf_of**
- **ended_at_time**
- **has_maximum_numeric_value**
- **has_minimum_numeric_value**
- **has_numeric_value**
- **has_raw_value**
- **has_unit**
- **latitude**
- **longi…