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Hola, como estan?
No tengo una consulta en especifico, agradeceria si alguien pudiera revisar y decirme si hay algun error grave. Seguro hay mas de uno porque no me pasan los asserts.
en la func…
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Hi all,
I just run sopa on a Merscope data and ran both Cellpose and Baysor to improve the segmentation.
My SpatialData object contains all the results as you can see here :
```
SpatialData ob…
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Hola buenas tardes, estoy teniendo problemas con este codigo. Me devuelve: ARRE
CAPA
ERROR
ERROR
REA
ORCO
RIO
RIO
ORCO
7: 7.c:46: main: Assertion `res[0].fila==0' failed.
Aborted (core dumpe…
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# Sopa de letras
Una única duda. Aunque al ser un ejercicio tipo parcial, agradezco cualquier corrección extra que se pueda hacer.
- Cuando cree la función `agregarPalabra` me dio la sensación d…
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## Description
When running the Cellpose segmentation using the `dask` backend, cell crashes after a while.
Multiple workers showed the error `exceeded 95% memory budget. Restarting...". Then aft…
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## Description
I am trying to use the sopa.io.wsi function to read a ome.tif file
## Reproducing the issue
image = sopa.io.wsi("Xenium_V1_hPancreas_Cancer_Add_on_FFPE_he_image.ome.tif", as_image=…
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`run_name` in the .xenium controls how samples appear in the xenium explorer
Right now `image_key` is used here which leads to all Xenium samples appearing as morphology_focus in the Xenium explorer.…
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### Describe the bug
From my testing and checking the NG forum, you cant seem to jump at all in this game, which is inaccurate looking at all the other videos playing the game.
### Expected behavior…
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Thanks for this amazing tool!
## Description
I have an sdata object with more than one image (MERSCOPE data with 7 z slices), and I used Baysor trough the sopa pipeline for segmentation. When run…
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Dear all,
I try to run Baysor using the sopa package (https://github.com/gustaveroussy/sopa), and I get this error:
"System image file failed consistency check: maybe opened the wrong version?"
…