-
Dear Developers,
I came across several important files while reading the research literature on coupledAE-patchseq, including ipfx_features.csv, sparse_pca_components_mMET_revision_Apr2020_v2.csv, …
-
------------
🐞 **Describe the bug:**
When running `biplot` on sparse models, the correlation vectors are showing as right angles. This only happens when `keepX` is specified.
------------
🔍…
-
A plain Principal Component Analysis algorithm was added in https://github.com/rust-ml/linfa/commit/7b6075e2dc9cc1c56ad7cd956bf996d69ce51d20. The next steps should improve upon edge-cases and features…
-
**Submitting author:** @StevenGolovkine (Steven Golovkine)
**Repository:** https://github.com/StevenGolovkine/FDApy
**Branch with paper.md** (empty if default branch):
**Version:** v1.0.2
**Editor:**…
-
You mentioned in the README that the R implementation is slow due to the use of the `prcomp` function.
Have you taken a look at the [irlba](https://cran.r-project.org/web/packages/irlba/index.html) p…
-
It looks like the function ac.tl.lsi is mostly just a call to `scipy.sparse.linalg.svds`.
https://github.com/scverse/muon/blob/d0e2c22896a6ea1c5617ed791ce4bf8b6ae1ab55/muon/_atac/tools.py#L52
I …
-
#### Description
Hi developers,
There's a sklearn model called [SparsePCA](https://scikit-learn.org/stable/modules/generated/sklearn.decomposition.SparsePCA.html), but it doesn't seem to be SPCA a…
-
-
### Bug description
Given a main qmd document `test.qmd`, when specifying the params externally in a `params.yml` file and trying the `quarto render test.qmd --execute-params params.yaml` the paramet…
-
For multiple genomic data, most of the information can be stored as matrices. The most striking example is with SNP data, which can be stored as matrices with thousands to hundreds of thousands of row…