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This probably needs quick ideas about how to fix, and then be split in multiple issues.
When Googling for the web service I found this page: https://www.wikipathways.org/index.php/Help:WikiPathways…
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Which is needed downstream for nanopublications, but actually for any system that uses the citation expectations for WikiPathways outlined at http://www.wikipathways.org/index.php/How_to_cite_WikiPath…
egonw updated
4 years ago
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Just to keep track of the remaining "problem children" from the recent sync of all approved pathways, here's a list pathways that can't be converted to pvjson, svg and png using our main script. I de…
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The recent data updates in 2.2 are shown in the data returned from the Data Source query
http://alpha.openphacts.org:3002/2.2/sources
Shows ChEMBL 20 and older wiki pathways data
Has the void…
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..as backup dump from http://data.openphacts.org/1.5/virtuoso/ is made on commercial Virtuoso, it might not be storage-compatible with open source virtuoso.
stain updated
8 years ago
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### Background
[Newt](https://newteditor.org/) [1] is a [Cytoscape.js](http://js.cytoscape.org/) [2] based, open source viewer and editor for pathways in [Systems Biological Graphical Notation (SBGN)…
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Seems like the order of authors is incorrect on WP5121. This then causes the list of first-authored pathways to be incorrect for the user incorrectly listed first. Example:
https://www.wikipathways…
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We have a bug in our communities logic. Currently, when a communities text file is updated (e.g., a WPID is add to a community list), then the community is added to the md file for that pathways. This…
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The lists of community pathways are incomplete.
Manual addition to the list should be replaced by an automated one, so that a pathway is added to the list as soon as it is tagged for that community …
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There is a max of actions that can run at the same time so we should consider what to do in those situations