-
## Description
The objective would be to generate susceptibility maps of the spine and the brain using segmentations generated for the dataset `whole-spine`.
## Current state
Currently, segme…
-
### Description
Enable mean CBF calculation in WMH_SEGM
### Requirements
1. Calculate the mean for standard space
- xASL_module_Population, line 244 - check how Lesions are added. Insert …
-
Hello, I've downloaded the datasets of WMH proposed in the website https://doi.org/10.34894/AECRSD, but I failed to match it with the code of boundary-loss in my server. It was written that "md5sum: W…
-
Dear experts,
First of all, thank you for this tool and making your pre-trained models publicly available. I tried to conduct the WMH segmentation in one subject using a T1w and a FLAIR image of…
-
Hi,
Would you please update the download link of multi_site_2d_transformer_Unet_mit_b5_0.81.pth and pmb_2d_transformer_Unet_mit_b5.pth?
Thanks
Hua
zhhsf updated
4 months ago
-
### Description
To streamline CVAge pre-processing, ExploreASL could provide output .csv's and the participants.tsv in a different manner. Requirements are:
- [ ] Note that `participants.tsv` in…
-
Dear all,
I'm trying to run UBO_detector for WMH extraction, and the following message appears below (from commandwindow). I will be very grateful if you can help me in this matter. My system i…
-
Hi , I have read your paper, the work is awesome. But I'm not quite sure how the model $M_{R_{WHM},R_{tum}}$ was trained. It was trained on the real FLAIR volumes from the SABRE dataset, and the BRATS…
-
Dear metAMOS developers,
I am having an error about "initpipeline"
I hope you can help me finding the solution.
Thank you for your attention
James Version
as follows：drwxr-xr-x. 3 root root …
-
### Description
Provide the possibility to evaluate ROI in the whole brain without the cerebellum using the brainmask_supratentorial.
### Tasks
- [x] Adapt brainmask_supratentorial such that it…