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Once again this comes from the discussion of https://bio.tools/workflow4metabolomics with @lecorguille and @joncison.
Currently there is a link type of "galaxyService" for bio.tools entries, but this…
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@RomainDallet
j'ai essayer de modifier ton code pour avoir accès à l'historique W4M00004 GCMS mais sans succès
id: import_shared_history
name: Import Shared History
description: An introduct…
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Feature request from entering the Workflow4Metabolomics bio.tools entry with @lecorguille:
https://bio.tools/workflow4metabolomics
This entry "uses" other preexisting entries such as https://bio.too…
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Hi,
A new way of using fillpeaks is present in xcms and might be intersting to update the wrapper. See
#https://community.france-bioinformatique.fr/t/fillchrompeaks-parameters/3425
`xcms_fillpe…
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Output files were provided by Yann.
The files are from XCMS + MSPurity.
I will take care of this in couple of weeks.
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https://github.com/workflow4metabolomics/lcmsmatching
Steps:
- [ ] Test `lcmsmatching` with our data and discover its interface.
- [ ] Compare results.
- [ ] Compare speed.
- [ ] Implement it in a ta…
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Can this tool be moved to the main W4M repo? Then we get containers for the tools.
Xref https://github.com/galaxyproject/planemo-monitor/pull/53#pullrequestreview-2326236381
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Bonjour
le lien vers les slides planemo en français est mort (http://www.france-bioinformatique.fr/sites/default/files/gd2015-planemo-1.0_0.pdf)
https://github.com/workflow4metabolomics/workflow4m…
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Since probmetab need the raw data somewhere.
It also need to deal with the single file used by xcms.xcmsSet
https://github.com/workflow4metabolomics/xcms/issues/2
So some fix must be done to ac…
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Hi all,
I tried the new VM available on workflow4metabolomics.org, and I noticed that the tool panel is organized in a specific way that does not match the organization in the prod instance. Is this …