missing-data-tracker
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A web application for tracking AMP-SCZ missing data
Tashrif Billah and Sylvain Bouix
Table of Contents
Description
https://predict2.bwh.harvard.edu/missing/ is a web application for tracking AMP-SCZ data e.g. arrival, protocol deviation, and QC ratings. It has site-specific and network-specific logins allowing decentralized access to AMP-SCZ data.
The application's backend is designed intelligently to allow front-end data manipulation such as filtering, sorting, selective rendering of columns. Moreover, users can filter for data types: MRI, EEG, CNB, and A/V/L and timepoints: baseline, month_2, month_6, etc:
Each page of the web application shows 50 subjects with option to change page. This pagination facilitates easier navigation over hundreds of subjects. Finally, it has a download feature to save the filtered data as a spreadsheet. The spreadsheet could be sent to stakeholder site so that they can correct any anomalies that are present.
Nginx config
To access the web app at https://NAME.harvard.edu/missing , add this snippet to /etc/nginx/nginx.conf:
location /missing/ {
proxy_pass http://localhost:8052;
}ERIS to VM rsync
cd /data/predict1/data_from_nda/
rsync -aR combined-AMPSCZ-data_*-day1to1.csv rc-predict-dev.partners.org:/data/predict1/data_from_nda/
rsync -aR Pronet_status/combined-*csv rc-predict-dev.partners.org:/data/predict1/data_from_nda/
rsync -aR Prescient_status/combined-*csv rc-predict-dev.partners.org:/data/predict1/data_from_nda/