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AliTVTeam
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AliTV
Visualize whole genome alignments as linear maps
https://alitvteam.github.io/AliTV/d3/AliTV.html
MIT License
70
stars
11
forks
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Add single genes to the image via the interface
#90
sonjafeitsch
closed
5 years ago
1
Reworking of user interface
#89
sonjafeitsch
closed
9 years ago
0
Error occurs in right-orientated tree
#88
sonjafeitsch
closed
9 years ago
0
Hidden features are re-drawn when hiding a sequence.
#87
iimog
closed
9 years ago
0
Color pickers in layout settings sometimes not correctly initialized
#86
iimog
closed
8 years ago
1
The slider range is not updated via setParameters()
#85
iimog
closed
9 years ago
0
Selected range of sliders not highlighted
#84
iimog
closed
9 years ago
0
Link Identity Scale is removed after exporting as svg
#83
sonjafeitsch
closed
9 years ago
0
Shift chromosomes
#82
sonjafeitsch
closed
9 years ago
0
Dynamic feature menus
#81
iimog
closed
9 years ago
0
Agenda preparation
#80
greatfireball
closed
9 years ago
1
Add a legend
#79
greatfireball
closed
9 years ago
1
Version number for frontend
#78
greatfireball
closed
9 years ago
0
Create demo sets
#77
greatfireball
closed
7 years ago
2
Evaluate mobile compatibility
#76
greatfireball
closed
7 years ago
2
Implement dynamic feature menus
#75
greatfireball
closed
9 years ago
0
Implement rotation of the tree
#74
greatfireball
closed
9 years ago
0
Implement chromosome rotation
#73
greatfireball
closed
9 years ago
0
Tutorial for the backend
#72
greatfireball
closed
7 years ago
1
Tutorial for the frontend
#71
greatfireball
closed
7 years ago
1
Update readthedocs
#70
greatfireball
closed
7 years ago
1
Update circular layout
#69
greatfireball
closed
5 years ago
3
Logo for AliTV
#68
greatfireball
closed
7 years ago
7
Tracks on Chromosomes (Javascript part)
#67
greatfireball
closed
5 years ago
1
Tracks on Chromosomes (Perl part)
#66
greatfireball
closed
5 years ago
1
Distinguish AliTV from other software packages
#65
greatfireball
closed
7 years ago
2
BioJS
#64
greatfireball
closed
5 years ago
3
Use case
#63
greatfireball
closed
7 years ago
2
Automatic ordering/rotating
#62
greatfireball
closed
5 years ago
2
Central version number for Perl code
#61
greatfireball
closed
7 years ago
3
Import Genbank files for features
#60
greatfireball
closed
7 years ago
1
Import GFF file for features
#59
greatfireball
closed
7 years ago
1
Import newick tree
#58
greatfireball
closed
7 years ago
1
Documentation part finished for version v1.0
#57
greatfireball
closed
7 years ago
0
Perl part finished for version v1.0
#56
greatfireball
closed
7 years ago
0
Javascript part finished for v1.0
#55
greatfireball
closed
7 years ago
0
Perl part finished
#54
greatfireball
closed
9 years ago
0
Develop
#53
sonjafeitsch
closed
9 years ago
0
Hiding of elements with non-unique names
#52
iimog
closed
9 years ago
1
Pan zoom genomes ui
#51
iimog
closed
9 years ago
0
Add license information for thirt party libraries
#50
iimog
closed
9 years ago
1
Log time recycles after 24 hours.
#49
iimog
closed
7 years ago
1
Changed theme to default
#48
iimog
closed
9 years ago
0
Docs
#47
iimog
closed
9 years ago
0
Make z level of feature type configurable
#46
iimog
opened
9 years ago
1
Perl multiple fasta
#45
iimog
closed
9 years ago
0
Auto update values of UI elements based on values from AliTV object.
#44
iimog
closed
9 years ago
0
Reverse feature orientation leads to wrong visualization
#43
iimog
closed
9 years ago
0
Fixed Limit for MaxLinkLength Slider
#42
iimog
closed
9 years ago
0
F0350 n drawing different feature classes
#41
sonjafeitsch
closed
9 years ago
0
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