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AliTVTeam
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AliTV
Visualize whole genome alignments as linear maps
https://alitvteam.github.io/AliTV/d3/AliTV.html
MIT License
69
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11
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Support for gff file upload for annotation
#135
Anupmas
opened
7 years ago
4
Support for alignment offsets
#134
greatfireball
opened
7 years ago
1
Remove bin folder
#133
iimog
closed
6 years ago
1
Version 1.0.3
#132
iimog
closed
7 years ago
2
Feature labels are duplicated if they end at the last base
#131
iimog
closed
7 years ago
1
Add citation info to README
#130
iimog
closed
7 years ago
3
Update citation info after final publication
#129
iimog
closed
7 years ago
1
Rc/v1.0.2
#128
iimog
closed
7 years ago
1
Rc/v1.0.2
#127
iimog
closed
7 years ago
3
Remove pullapprove
#126
greatfireball
closed
7 years ago
1
Rc/v1.0.1
#125
iimog
closed
7 years ago
2
Rc/version1.0.0
#124
iimog
closed
7 years ago
2
Default features include ndh, ycf and invertedRepeat
#123
iimog
opened
7 years ago
1
Form of invertedRepeats should be determined to arrow instead of rect by default
#122
sonjafeitsch
closed
8 years ago
1
Wrong tree after generating JSON using AliTV.pl
#121
sonjafeitsch
closed
8 years ago
1
Filtering uses internal ids rather than name
#120
iimog
opened
8 years ago
0
Add xmlns to svg element
#119
iimog
closed
8 years ago
1
Filter links by length slider not fine grained enough
#118
iimog
opened
8 years ago
0
Develop
#117
iimog
closed
8 years ago
1
Exported SVG lacks namespace definition
#116
greatfireball
closed
8 years ago
0
Generated SVG contains errors identified by SVG validator
#115
greatfireball
closed
5 years ago
1
Updated submodule AliTV-perl-interface to v0.1.7
#114
greatfireball
closed
8 years ago
2
Updated submodule AliTV-perl-interface to v0.1.7
#113
greatfireball
closed
8 years ago
2
Sonja feature labels
#112
sonjafeitsch
closed
8 years ago
2
Post tool on labworm
#111
iimog
closed
6 years ago
1
Upgrade d3 to version 4
#110
iimog
closed
5 years ago
1
Move chromosome right/left includes hidden chromosomes
#109
iimog
opened
8 years ago
1
Error when shifting chromosomes with "." in id
#108
iimog
closed
8 years ago
1
Update README.org
#107
greatfireball
closed
8 years ago
5
Update readme
#106
iimog
closed
8 years ago
2
Moving contigs/genomes with drag&drop
#105
nterhoeven
closed
5 years ago
2
Link transparency
#104
nterhoeven
closed
8 years ago
1
How to add multiple genomes?
#103
a113n
closed
7 years ago
6
Circular representation should not be emphasized
#102
greatfireball
closed
8 years ago
0
Version for JSON file content
#101
greatfireball
closed
5 years ago
1
Manage external dependencies with package manager
#100
iimog
closed
5 years ago
0
Update external libraries
#99
iimog
closed
8 years ago
1
Update interface
#98
sonjafeitsch
closed
8 years ago
0
Other (than features) location for links in data.json
#97
greatfireball
closed
5 years ago
0
Display names of sequences
#96
greatfireball
closed
8 years ago
0
Fix tree drawing
#95
iimog
closed
8 years ago
0
Change featureId for preventing aliTV of re-drawing hidden features. …
#94
iimog
closed
8 years ago
0
Update slider range
#93
iimog
closed
8 years ago
0
Highlight slider range
#92
iimog
closed
8 years ago
0
Change UI for "shift chromosomes"
#91
iimog
closed
8 years ago
0
Add single genes to the image via the interface
#90
sonjafeitsch
closed
5 years ago
1
Reworking of user interface
#89
sonjafeitsch
closed
8 years ago
0
Error occurs in right-orientated tree
#88
sonjafeitsch
closed
8 years ago
0
Hidden features are re-drawn when hiding a sequence.
#87
iimog
closed
8 years ago
0
Color pickers in layout settings sometimes not correctly initialized
#86
iimog
closed
8 years ago
1
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