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AllenCellModeling
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pytorch_fnet
Three dimensional cross-modal image inference
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Validate indices of input CSVs for Fnet datasets
#136
counkomol
opened
5 years ago
0
Update bpds
#135
counkomol
closed
5 years ago
1
update to newest version of t4 and use most recent AICS data package
#134
gregjohnso
closed
5 years ago
0
Update csv splitter command-line tool
#133
counkomol
opened
5 years ago
0
Update predict command-line tool so it can read options from jsons
#132
counkomol
opened
5 years ago
0
Reopening: "RuntimeError: sequence argument must have length equal to input rank"
#131
NiklasTR
closed
5 years ago
2
Update BufferedPatchDataset
#130
counkomol
closed
4 years ago
1
Use logging
#129
counkomol
closed
5 years ago
0
Convert to pathlib
#128
counkomol
opened
5 years ago
0
Add pylint coverage
#127
counkomol
closed
4 years ago
0
Update readme
#126
counkomol
closed
5 years ago
0
Fnet train cannot create jsons in the cwd
#125
counkomol
opened
5 years ago
0
Remove gpu_id from saved fnet model state
#124
counkomol
opened
5 years ago
2
Implement pre-predict and post-predict transforms in fnet model
#123
counkomol
opened
5 years ago
0
Allow number of training iterations to be specificed in terms of epochs
#122
counkomol
opened
5 years ago
0
Convert print statements to logging module calls
#121
counkomol
closed
4 years ago
0
Training script should handle jsons with missing fields
#120
counkomol
opened
5 years ago
0
RuntimeError: sequence argument must have length equal to input rank
#119
NiklasTR
closed
5 years ago
3
unrecognized arguments: --dataset_kwargs {
#118
mmitterma
closed
5 years ago
6
change name is setup.py from pytorch_fnet to fnet
#117
donovanr
closed
5 years ago
0
torch >= 1.0
#116
donovanr
closed
5 years ago
0
change torch==1.0 to torch>=1.0
#115
donovanr
closed
5 years ago
1
Update readme
#114
counkomol
closed
4 years ago
0
Python API for Fnet "train" and "predict"
#113
gregjohnso
opened
5 years ago
0
Tests for MultiChTiffDataset
#112
gregjohnso
opened
5 years ago
0
Update pytorch
#111
counkomol
closed
5 years ago
2
Add tests for command-line functionality
#110
counkomol
closed
5 years ago
0
feature/add-example-scripts
#109
gregjohnso
closed
5 years ago
2
Quilt example (downloading and training)
#108
gregjohnso
closed
5 years ago
0
Better predict
#107
counkomol
closed
5 years ago
0
Syntax eror in test script
#106
mmitterma
closed
5 years ago
1
Specify dimension requirement
#105
jxchen01
opened
5 years ago
4
More tests
#104
counkomol
closed
5 years ago
0
Env test
#103
counkomol
closed
5 years ago
0
Problem when running with another dataset
#102
cindyfu
closed
5 years ago
3
error when I try to run ./train_model.sh dna 0
#101
sll513
closed
5 years ago
5
Stitched
#100
gregjohnso
closed
5 years ago
1
Terminate if error function reads "NAN"
#99
gregjohnso
opened
6 years ago
1
General updates
#98
counkomol
closed
6 years ago
0
Add version of network with specifiable parameters and update platfor…
#97
counkomol
closed
6 years ago
0
pip install doesn't install submodules
#96
evamaxfield
closed
5 years ago
1
Add multi-gpu and save/load/predict tests for fnet_model
#95
counkomol
closed
6 years ago
0
Add README to create symlinks and revert scripts/predict.sh to simple…
#94
counkomol
closed
6 years ago
0
updates for downloading data and a correct prediction script
#93
gregjohnso
closed
6 years ago
0
Update bufferedpatchdataset with no buffer swap functionality, update…
#92
counkomol
closed
6 years ago
0
General updates
#91
counkomol
closed
6 years ago
1
Readme updates
#90
counkomol
closed
6 years ago
0
Model updates
#89
gregjohnso
closed
5 years ago
0
updating README
#88
fcollman
closed
6 years ago
0
General updates
#87
counkomol
closed
6 years ago
0
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