AllenInstitute / npc_sessions

Tools for accessing and packaging data from behavior and epyhys sessions from the Mindscope Neuropixels team, in the cloud.
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Normalize implant names in cloud db #86

Open bjhardcastle opened 5 months ago

bjhardcastle commented 5 months ago
arjunsridhar12345 commented 5 months ago

These should be good once the sync happens Sunday. A note below:

Checked with Ethan and confirmed, a couple of the early templeton subjects (620263, 620264) used an older implant TS5

We can discuss later if needed depending on if that will break anything and such.

bjhardcastle commented 5 months ago

Thanks a lot for doing this. 'TS5' should be fine, as long as it's consistent.


From: arjunsridhar12345 @.> Sent: Friday, April 5, 2024 5:11:02 PM To: AllenInstitute/npc_sessions @.> Cc: Ben Hardcastle @.>; Author @.> Subject: Re: [AllenInstitute/npc_sessions] Normalize implant names in cloud db (Issue #86)

These should be good once the sync happens Sunday. A note below:

Checked with Ethan and confirmed, a couple of the early templeton subjects (620263, 620264) used an older implant TS5

We can discuss later if needed depending on if that will break anything and such.

— Reply to this email directly, view it on GitHubhttps://github.com/AllenInstitute/npc_sessions/issues/86#issuecomment-2040804603, or unsubscribehttps://github.com/notifications/unsubscribe-auth/APD42FH4GRSJFOZEJ7XF6F3Y344RNAVCNFSM6AAAAABFYGX7OOVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDANBQHAYDINRQGM. You are receiving this because you authored the thread.Message ID: @.***>

bjhardcastle commented 5 months ago

a couple of the early templeton subjects (620263, 620264) used an older implant TS5

@arjunsridhar12345 I think I just understood this: you mean they're an older version of TS5 that is not the "official" TS5?

2002/TS5 seem to be synonymous, and we use 2002 in npc_shields.

@egmcbride Should 620263 & 620264 be labelled something other than 2002?

arjunsridhar12345 commented 5 months ago

yeah i believe its an older version that follows this configuration: \\allen\programs\mindscope\workgroups\dynamicrouting\dynamic_gating_insertions\implant_designs\TS5.PNG

bjhardcastle commented 5 months ago

Ok thanks - I think that is the true TS5, and 2002 is not synonymous with TS5.

More info from Heston S a while back:

• 0251-110-42, original concept for the DR implant. Referred to as ‘the football’ in the entries below. Also called the ‘42’ implant • 0270-100-04, modified version of the 42 implant. Tamina did the mods, hence these are referred to as ‘Tamina Special #4’ or ‘TS-4’ • 0270-100-05, another modified 42 implant. ‘Tamina Special #5’ or ‘TS-5’ • 0283-200-001, Templeton Implant V.1. Requested by Ethan McBride, first implant made using our new production process • 0283-200-002, I’m referring to this as ‘Dynamic Routing V.1’ since this is slated to be the first production Dynamic Routing Implant. The one with a bunch of holes.

42/Football: football

TS4: TS4

TS5: TS5

Templeton: templeton

2002 (DR1): DR1