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AngryMaciek
/
warlock
Warlock is a snakemake workflow to spawn multiple demons (deme-based oncology models) as jobs running around on a cluster environment 😈😈
https://github.com/AngryMaciek/warlock
Apache License 2.0
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refactor: add example notebook back (mybinder)
#58
AngryMaciek
closed
3 months ago
0
refactor: add gitpod
#57
AngryMaciek
closed
3 months ago
0
Demonanalysis
#56
AngryMaciek
closed
3 months ago
0
refactor: fix all deps into one conda env
#55
AngryMaciek
closed
3 months ago
0
add a devcontainer configuration
#54
AngryMaciek
closed
7 months ago
2
refactor: remove Gitpod mechanism
#53
AngryMaciek
closed
7 months ago
0
feat: include muller plots from demonanalysis pkg
#52
AngryMaciek
closed
7 months ago
0
feat: add demonanalysis to the workflow PART 1/2
#51
AngryMaciek
closed
7 months ago
0
feat: add demonanalysis as a submodule
#50
AngryMaciek
closed
7 months ago
0
refactor: remove old Gitpod configuration
#49
AngryMaciek
closed
8 months ago
0
chore: fix 8-letter codes for dirs
#48
AngryMaciek
closed
1 year ago
0
`docker.service` fails to start
#47
vesmanojlovic
closed
1 year ago
6
ci: add md5 checks
#46
AngryMaciek
closed
1 year ago
0
add `md5` sum comparison for output files in the ci
#45
AngryMaciek
closed
1 year ago
0
ci: fix docker tag on push
#44
AngryMaciek
closed
1 year ago
0
chore: add Dockerfile + ci image test and DockerHub upload
#42
AngryMaciek
closed
1 year ago
0
mybinder does not start
#41
AngryMaciek
closed
1 year ago
3
ci: add CHANGELOG update workflow
#40
AngryMaciek
closed
1 year ago
0
docs: clean CONTRIBUTING file
#39
AngryMaciek
closed
1 year ago
0
ci: add tag workflow on version bump
#38
AngryMaciek
closed
1 year ago
0
refactor: improve the repository with several small mechanisms
#37
AngryMaciek
closed
1 year ago
0
refactor: include various cool repo mechanisms
#36
AngryMaciek
closed
1 year ago
0
fix: gitpod environment build
#35
AngryMaciek
closed
1 year ago
1
refactor: set proper workflow name
#34
AngryMaciek
closed
1 year ago
0
refactor: adjust params for binder nb
#33
AngryMaciek
closed
1 year ago
0
docs: add Gitpod integration
#32
AngryMaciek
closed
1 year ago
0
feat: allow to clone a specific commit from demon
#31
AngryMaciek
closed
1 year ago
1
chore: adjust binder simulation parameters
#30
AngryMaciek
closed
1 year ago
0
feat: Gitpod integration
#29
AngryMaciek
closed
1 year ago
0
docs: agree on a proper name
#28
AngryMaciek
closed
1 year ago
0
bugfix: fix breaking CI
#27
AngryMaciek
closed
2 years ago
0
refactor: fix minor comments: docs, bugs
#26
AngryMaciek
closed
2 years ago
1
Minor comments
#25
AngryMaciek
closed
2 years ago
0
refactor: include demon_model as git submodule
#24
AngryMaciek
closed
2 years ago
0
bugfix: correct README URL
#23
AngryMaciek
closed
2 years ago
0
feat: add interactive example with binder notebook
#22
AngryMaciek
closed
2 years ago
0
feat: add macOS support
#21
AngryMaciek
closed
2 years ago
0
refactor: rewire the Snakefile
#20
AngryMaciek
closed
2 years ago
0
docs: add previous papers to README
#19
AngryMaciek
closed
2 years ago
0
ci: clean tests
#18
AngryMaciek
closed
2 years ago
0
JOSS checklist
#17
AngryMaciek
closed
2 years ago
1
refactor: clean test directories
#16
AngryMaciek
closed
2 years ago
1
docs
#15
AngryMaciek
closed
2 years ago
2
feat: add SLURM snakemake profile
#14
AngryMaciek
closed
2 years ago
0
feat: add --cores custom param
#13
AngryMaciek
closed
2 years ago
0
docs: README
#12
AngryMaciek
closed
2 years ago
2
feat: encapsulate demon into a workflow
#11
AngryMaciek
closed
2 years ago
0
double-check final output of demon / linking
#10
AngryMaciek
closed
2 years ago
3
ci: add demon compilation
#9
AngryMaciek
closed
2 years ago
0
chore: init setup & old code integration
#8
AngryMaciek
closed
2 years ago
0
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