AppliedBioinformatics / runBNG

An easy way to run BioNano genomic analysis
MIT License
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max and min avgintensity in bnxstats #9

Closed JennyHTLee closed 6 years ago

JennyHTLee commented 6 years ago

Hello Andy,

Is there a small mistake in the bnxstats utility where "maxten" and "minten" should be reversed (Line 772 and 773 of runBNG script)?

My command: runBNG bnxstats -b Molecules.bnx -p expbnxstats -o ./

A snippet of output I get: Maximum avgIntensity is: 0.025330 Minimum avgIntensity is: 0.996826 Average avgIntensity is: 0.265131

Thanks :)

Cheers, Jenny

yyx8671 commented 6 years ago

Thanks Jenny,

You are right. They should be reversed.

Cheers, Andy