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Arcadia-Science
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prehgt
A pipeline for lightweight screening of Eukaryotic genomes and transcriptomes for recent HGT
MIT License
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prepend HGT score values with rank (0, 1, 2, etc) so they can be sorted in a heirarchically meaningful way
#10
taylorreiter
closed
1 year ago
1
update VOG db hmms to latest database version
#9
taylorreiter
opened
1 year ago
0
consider combining R parsing scripts into the same script/process
#31
taylorreiter
opened
1 year ago
0
update BLAST parsing
#8
taylorreiter
closed
1 year ago
0
document figure generation for hgt roundup meeting
#7
taylorreiter
closed
1 year ago
1
tmp pull request into branch
#6
taylorreiter
closed
1 year ago
0
Add BLAST rules, hgt candidate inference, hgt candidate annotation, and scripts to combine results
#5
taylorreiter
closed
1 year ago
0
documenting column definitions for HGT
#4
taylorreiter
closed
1 year ago
1
Document metadata table creation using notebooks
#3
taylorreiter
closed
1 year ago
1
start pipeline
#2
taylorreiter
closed
1 year ago
1
S. pombe positive control
#1
taylorreiter
closed
1 year ago
0
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