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LD Pred risk scores for afib
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Results of sensitivity analysis when including TIA as event outcome #18

Open jackosullivanoxford opened 4 years ago

jackosullivanoxford commented 4 years ago

This describes the files and results when I included TIA as an event outcome. In these analyses, both the AF genotype data includes ICD and self-reported codes, and the outcome/phenotype data (stroke and TIA) includes both ICD and self-reported codes

jackosullivanoxford commented 4 years ago

The following file contains the step 3 output: /oak/stanford/groups/euan/projects/risk_scores/ldpred_CES/step3/AF_ICD_and_self_reported

With the output files named: step3_out_ICD_and_selfr_LDpred_p1.*.txt

jackosullivanoxford commented 4 years ago

The R script, which runs the logistic regression on these data, is located at: /Users/jackosullivan/Documents/Stanford_work/AF_G/2nd_run_through/Post_euan_slack/AF_G_analyses.R