AshleyLab / risk_scores

LD Pred risk scores for afib
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step 1. split the afib subjects into 80% training data and 20% test data with the R script "generate_test_and_train_split.R"

step 2. extract the PLINK data for training/test splits with the script : "sbatch.sh" on sherlock, which is a wrapper for "subset_genetics_to_afib.sh"

step 3. merge the chromosome-specific plink subset files into a single set of files with the command: "merge_plink_files_across_chroms.sh"