AthenaEPI dmipy issues - Githubissues

AthenaEPI / dmipy

The open source toolbox for reproducible diffusion MRI-based microstructure estimation

MIT License

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issues

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median_otsu misused in three_tissue_response_dhollander16

#76 matteofrigo closed 4 years ago
3
order of output in `three_tissue_response_dhollander16`

#75 matteofrigo closed 4 years ago
1
Fixes flake8 errors.

#74 rutgerfick closed 4 years ago
1
Fix travis builds

#73 demianw closed 4 years ago
3
SS3T-CSD released

#72 thijsdhollander opened 4 years ago
2
Clip SDM to avoid instabilities

#71 weningerleon closed 5 years ago
3
FIX: change use of print for py3 compatibility

#70 matteofrigo closed 5 years ago
0
print statement not compatible with python 3

#69 matteofrigo closed 5 years ago
1
Clipping Signal Decay Metric above 10 to 10

#68 rutgerfick closed 5 years ago
1
Small bug fix in signal_decay_metric

#67 weningerleon closed 5 years ago
11
Adds generalized multi-tissue modeling and updates tissue response models

#66 rutgerfick closed 5 years ago
1
why not DKI model?

#65 foxet closed 5 years ago
1
about parameters for verdict model

#64 foxet closed 5 years ago
1
Update noddi-watson example for second layer stick/zeppelin fraction viz

#63 rutgerfick closed 5 years ago
0
A little confuse about the explaination for noddi parameter's maps

#62 foxet closed 5 years ago
2
"Cannot estimate signal grid with voxel-dependent x0_vector."

#61 foxet closed 5 years ago
1
Bugfix setting allow_pickle=True for np.load() for numpy version >1.16.1

#60 rutgerfick closed 5 years ago
0
does noddi need delta [ms] and |Delta[ms]?

#59 foxet closed 5 years ago
3
there is error when loading SD2BinghamDistributed

#58 foxet closed 5 years ago
4
Adds smt-noddi and fixed volume fraction functionality to brute2fine optimizer

#57 rutgerfick closed 5 years ago
0
Bundle model should remove input model orientientations

#56 rutgerfick opened 5 years ago
0
Fix sphinx docs

#55 rutgerfick opened 5 years ago
0
Fix CI Travis

#54 rutgerfick closed 4 years ago
1
Update FOD vizualization

#53 rutgerfick opened 5 years ago
0
Axtiveax example

#52 rutgerfick opened 5 years ago
0
Adds non-distributed bundle model to distributed models.

#51 rutgerfick closed 5 years ago
0
Fixes integer rounded printing of tournier13 response convergence

#50 rutgerfick closed 5 years ago
0
Includes generalized S0 tissue responses in signal simulation and fitting.

#49 rutgerfick closed 5 years ago
0
Adds IVIM example.

#48 rutgerfick closed 5 years ago
0
Adds setting parameter optimization bounds functionality.

#47 rutgerfick closed 5 years ago
0
Adds catch for fitting data without b0 measurements.

#46 rutgerfick closed 5 years ago
0
should i ignore these warning ?

#45 foxet closed 5 years ago
6
Invariants PR

#44 maurozucchelli closed 5 years ago
1
Dmipy 0.2 framework refactor

#43 rutgerfick closed 4 years ago
0
BUG: Fix Callaghan sphere model

#42 mjallais opened 5 years ago
0
Refactor model properties

#41 rutgerfick closed 5 years ago
2
Generalized AMICO

#40 rutgerfick opened 5 years ago
0
IVIM parameter conversion to blood volume fractions

#39 rutgerfick opened 5 years ago
0
Add spherical convolution reference to CSD and response function explanation

#38 rutgerfick opened 5 years ago
0
Ability to easily set parameter optimization ranges

#37 rutgerfick closed 5 years ago
0
Fixel Analysis: fitting SH-FOD with parametric distributions

#36 rutgerfick opened 5 years ago
0
Fixel Analysis: Apparent Fiber Density

#35 rutgerfick opened 5 years ago
0
Update acquisition scheme and model handling for clinical data (deltas unknown)

#34 rutgerfick closed 5 years ago
1
Refactor acquisition scheme to take empty deltas for clinical data

#33 sitek closed 5 years ago
5
General catch for error in optimizer

#32 rutgerfick opened 5 years ago
0
Fall-back for MIX to to deal with tortuosity constraints

#31 rutgerfick closed 5 years ago
1
Anisotropic IVIM

#30 rutgerfick opened 5 years ago
3
Refactor parameter links & optimization constraints

#29 rutgerfick opened 5 years ago
2
Fractional parameter needs to be able to take non-zero lower bound.

#28 rutgerfick opened 5 years ago
0
Test if multi-TE data is handled correctly for multi-tissue models

#27 rutgerfick opened 5 years ago
0

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