This repository is for managing issues and documents for the GA4GH integration group.
Get expert annotations for your BRCA variants.
Implement the GA4GH Beacon protocol using a GA4GH Genomics API client.
Contains demonstration code for accessing the bioinformatics APIs.
An HTTP testing suite for the reference GA4GH server.
Lists the contents of a ga4gh server.
Implement ga4gh interfaces over the Gemini variant database.
Contains ansible playbook for performing compliance and load testing on a server.
Protocol buffers IDL describing genomics data structures and protocols.
A GA4GH genomics API implementation written in Python/Flask.
Various tools to ingest the Treehouse RNASeq reference compendium into a ga4gh server perform some basic differential expression level analysis.
Converts vcf to GA4GH objects for storage and analysis.
How to update all submodules: git submodule foreach git pull origin master