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BICCN / cell-locator

manually align specimens to annotated 3D spaces
https://cell-locator.readthedocs.io
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MNI annotation needs to be double sided #164

Closed lydiang closed 3 years ago

lydiang commented 3 years ago

Environment

All environments

MNI annotation needs to be double sided to allow users/anatomists to efficiently navigate and find the right position to pin the sample

Expected behavior

MNI atlas is annotated with structures on both side

How to Reproduce

  1. Start the application

image

jcfr commented 3 years ago

Here is the full atlas:

http://download.alleninstitute.org/informatics-archive/allen_human_reference_atlas_3d_2020/version_1/

File: annotation_full.nii.gz