PerkinElmer Operetta Importer Command and API

This is an improved version of the original Operetta Importer Script we had written in Groovy a couple of years ago.

Features

Its is now a clear(ish) API and a nice SciJava InteractiveCommand

We are looking for people to test it, so feel free to drop @lacan a line!

Documentation

We are hosting the JavaDoc as GitHub pages at https://biop.github.io/ijp-operetta-importer/

The main class you should focus your attention on is OperettaManager

If you'd like to see some examples on how it can be used, please check the Scripts folder. This contains a few Groovy examples on how to call the Operetta Importer API

Installation in Fiji

Go to Help > Update...

Click Manage Update Sites

Activate the PTBIOP update site.

WARNING: This update site override the Grid / Collection stitching plugin. This is because a bug is not resolved for XY+T datasets