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BUNPC
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psoct_vessel_graphing
Suite of tools for segmenting vessels from PS-OCT images and then converting the segments to a graph.
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Improve time efficiency of loop removal
#33
mjhyman
opened
6 months ago
0
30 parallelize loop removal
#32
mjhyman
closed
8 months ago
0
30 parallelize loop removal
#31
mjhyman
closed
8 months ago
0
parallelize loop removal
#30
mjhyman
closed
8 months ago
0
28 improve frangi filter speed
#29
mjhyman
closed
9 months ago
0
improve frangi filter speed
#28
mjhyman
closed
9 months ago
0
Feature: background subtraction
#27
mjhyman
opened
10 months ago
0
Develop
#26
mjhyman
closed
12 months ago
0
1 regraph connects unconnected edges
#25
mjhyman
closed
12 months ago
0
discontinuous segmentation
#24
mjhyman
opened
1 year ago
1
20 feature initialize graph in main script
#23
mjhyman
closed
1 year ago
0
skeletonization creates loops
#22
mjhyman
closed
12 months ago
1
optimize frangi gaussian filtering
#21
mjhyman
closed
9 months ago
0
Feature - initialize graph in main script
#20
mjhyman
closed
1 year ago
1
Pr/1
#19
mjhyman
closed
1 year ago
0
Develop
#18
mjhyman
closed
1 year ago
0
Modify segmentation for 2PM
#17
mjhyman
opened
1 year ago
0
Use builtin graph analyses packages
#16
mjhyman
closed
1 year ago
1
7 edges incorrectly classified as vessels
#15
mjhyman
closed
1 year ago
0
7 edges incorrectly classified as vessels
#14
mjhyman
closed
1 year ago
1
Issue #5 -- voxel size is hard coded
#13
mjhyman
closed
1 year ago
1
Feature: update Data in seg_to_graph
#12
mjhyman
closed
1 year ago
1
Feature: run regraph and pruning in seg_to_graph
#11
mjhyman
opened
1 year ago
0
Bug: Prune Segment is non functional
#10
mjhyman
opened
1 year ago
0
Validation: test suite for testing segmentation and graphing
#9
mjhyman
opened
1 year ago
0
Feature: toggle between 2 photon and OCT in GUI
#8
mjhyman
closed
6 months ago
2
Edges incorrectly classified as vessels.
#7
mjhyman
closed
1 year ago
1
vesGraphValidate - unverifiedIdx is not updated
#6
mjhyman
closed
1 year ago
1
Bugfix: pixel size is hard coded
#5
mjhyman
closed
1 year ago
1
Develop
#4
mjhyman
closed
1 year ago
0
Fix function to remove loops and clusters of nodes
#3
mjhyman
closed
12 months ago
4
Get Segment Info + Update Branch Info (array dimension errors)
#2
mjhyman
closed
1 year ago
3
Regraph Connects Unconnected Edges
#1
mjhyman
closed
12 months ago
3