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BiAPoL
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Quantitative_Bio_Image_Analysis_with_Python_2022
This repository hosts notebooks, information and data for the Quantitative Bio-Image Analysis with Python Course 2022.
https://BiAPoL.github.io/Quantitative_Bio_Image_Analysis_with_Python_2022
Creative Commons Attribution 4.0 International
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Added day4 recap material to toc
#55
jo-mueller
closed
1 year ago
0
Fix links
#54
jo-mueller
closed
1 year ago
0
add surface pdfs
#53
jo-mueller
closed
1 year ago
0
Upload slides for day 4's recap session and link them from the corresponding reademe
#52
haesleinhuepf
closed
1 year ago
1
Copyright statement
#51
haesleinhuepf
opened
1 year ago
1
use mamba instead of conda
#50
haesleinhuepf
closed
1 year ago
2
Remove teaching the LayerDataTuple in the napari exercise
#49
haesleinhuepf
closed
1 year ago
2
open source & open access
#48
thawn
opened
1 year ago
1
added clustering materials
#47
jo-mueller
closed
1 year ago
0
in general, text is very small
#46
thawn
opened
1 year ago
0
added slides to jupyter-book
#45
jo-mueller
closed
1 year ago
0
screenshots with black background are hard to read on a beamer
#44
thawn
opened
1 year ago
2
added data to stats repo
#43
jo-mueller
closed
1 year ago
0
improve plotting exercise example
#42
thawn
closed
1 year ago
2
Statistics session comments
#41
thawn
opened
1 year ago
1
Update on plugins
#40
zoccoler
closed
1 year ago
0
Update 02_2D_unet_training.ipynb
#39
jo-mueller
closed
1 year ago
0
added torch to toc
#38
jo-mueller
closed
1 year ago
0
Link slides from the readme.md files
#37
haesleinhuepf
closed
1 year ago
2
changed headline
#36
jo-mueller
closed
1 year ago
0
Update deep learning materials
#35
jo-mueller
closed
1 year ago
0
added another background removal notebook
#34
jo-mueller
closed
1 year ago
0
fixed color range in correlation matrix
#33
jo-mueller
closed
1 year ago
0
replaced torch mnist notebook with 2D unet notebook
#32
jo-mueller
closed
1 year ago
0
"Structure element" -> "Footprint"
#31
haesleinhuepf
opened
1 year ago
4
Copyright / license statements
#30
haesleinhuepf
opened
1 year ago
0
Diverging colormaps for correlation
#29
haesleinhuepf
closed
1 year ago
0
remove mnist example
#28
haesleinhuepf
closed
1 year ago
0
Napari plugins
#27
zoccoler
closed
1 year ago
0
Day2 content reorganization
#26
jo-mueller
closed
1 year ago
0
Changed Day 5 headline
#25
jo-mueller
closed
1 year ago
0
moved surface tutorials to separate top-level directory
#24
jo-mueller
closed
1 year ago
0
day4 TOC
#23
haesleinhuepf
closed
1 year ago
1
Fill readmes with content and proper headlines
#22
haesleinhuepf
opened
1 year ago
4
Check file endings
#21
haesleinhuepf
closed
1 year ago
1
bring day5 in 2-level structure
#20
haesleinhuepf
closed
1 year ago
2
fixed typo
#19
jo-mueller
closed
1 year ago
0
Fix toc for datascience stuff
#18
jo-mueller
closed
1 year ago
0
Add statistics notebooks
#17
jo-mueller
closed
1 year ago
0
Pandas seaborn
#16
zoccoler
closed
1 year ago
0
Split day2 content
#15
haesleinhuepf
closed
1 year ago
2
Remove day1 directory
#14
haesleinhuepf
closed
1 year ago
1
re-arange folders
#13
zoccoler
closed
1 year ago
0
add 3D filters with isotropic data
#12
zoccoler
closed
1 year ago
0
Filters
#11
zoccoler
closed
1 year ago
0
Reading images, folder structures and napari
#10
zoccoler
closed
1 year ago
0
Add correlation materials
#9
jo-mueller
closed
1 year ago
0
added notebooks for thresholding, background subtraction & morphology
#8
jo-mueller
closed
1 year ago
0
added notebooks for deep learning
#7
jo-mueller
closed
1 year ago
0
add materials
#6
jo-mueller
closed
1 year ago
0
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