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BigDataBiology
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AMPSphereWebsite
Website for global antimicrobial peptides.
https://ampsphere.big-data-biology.org/home
MIT License
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Current example search leads to no results and bad message
#42
luispedro
closed
2 years ago
1
Download CSV in Browser page leads to unnecessary large file
#41
celiosantosjr
closed
2 years ago
1
Better results page when there are zero hits
#40
luispedro
opened
2 years ago
0
The WIP note accumulates counter everytime you go to home
#39
luispedro
opened
2 years ago
0
Show HMM logo for each family (if available)
#38
luispedro
closed
2 years ago
3
HMM logos should be SVG
#37
luispedro
closed
2 years ago
2
Cropped HMM logos?
#36
luispedro
closed
2 years ago
0
Download sequences for the small families
#35
luispedro
opened
2 years ago
0
Sequence downloads not working
#34
luispedro
closed
2 years ago
1
Change microbial sources filter to adopt gtDB taxonomic classification tree
#33
AdeBC
closed
2 years ago
5
Introduce Quasar through CDN
#32
AdeBC
closed
2 years ago
0
Better about text
#31
luispedro
closed
2 years ago
1
Dev
#30
AdeBC
closed
2 years ago
1
New layout without text search bar
#29
AdeBC
closed
2 years ago
0
HTTPS for the backend
#28
AdeBC
closed
2 years ago
1
Merge DEV to Main
#27
AdeBC
closed
2 years ago
1
Minor improvements
#26
luispedro
closed
2 years ago
1
Bump axios from 0.21.1 to 0.21.2 in /frontend
#25
dependabot[bot]
closed
2 years ago
0
change graphs of features to include dots for the family and for the entire AMPSphere (compare the AMP with its own family and the resource)
#24
celiosantosjr
opened
3 years ago
0
add a short help for each variable
#23
celiosantosjr
closed
2 years ago
0
add consensus sequence
#22
celiosantosjr
closed
3 years ago
0
Calling it "host" may be a bit confusing: the microbe is the host of the AMP as well. Also, some of the AMPs do not have a host
#21
celiosantosjr
closed
2 years ago
0
Migrate all components to adopt Quasar
#20
AdeBC
closed
2 years ago
1
Why not always perform both "MMSeqs" & "HMM" searches?
#19
luispedro
opened
3 years ago
1
Empty geo, host and habitat distribution for AMPs without associated Metagenomes
#18
AdeBC
closed
2 years ago
2
Independent probabilities of helix, turn and sheet.
#17
AdeBC
closed
3 years ago
1
presentation
#16
celiosantosjr
closed
3 years ago
1
Redraw feature graphs on AMP page
#15
AdeBC
closed
2 years ago
0
Make the website more official
#14
AdeBC
closed
2 years ago
1
Quality badges for each AMP
#13
AdeBC
closed
2 years ago
1
Optimize text search performance
#12
AdeBC
closed
2 years ago
4
Color matching issue
#11
AdeBC
closed
2 years ago
1
Support pagination on each search result page
#10
AdeBC
opened
3 years ago
0
Enhance layout responsiveness
#9
AdeBC
closed
3 years ago
2
Page info doesn't follow filter criterias
#8
AdeBC
closed
3 years ago
0
Accelerate statistics API by having a statistics results table in the database
#7
AdeBC
closed
3 years ago
0
Optimize the performance of the frontend
#6
AdeBC
closed
2 years ago
0
Accelerate mmseqs search by creating database and index in advance.
#5
AdeBC
closed
3 years ago
0
Possible features for the future
#4
AdeBC
closed
2 years ago
0
Todos & progress for the development
#3
AdeBC
closed
3 years ago
8
init database
#2
AdeBC
closed
3 years ago
0
Todos for demo website
#1
AdeBC
closed
3 years ago
1