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BioDataFuse
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pyBiodatafuse
Python package for biodatafuse project.
MIT License
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PCS usecase and fixing errors in the package while running the usecase
#170
tabbassidaloii
opened
1 day ago
0
Preserve the MedDRA IRIs for Adverse Events when querying OpenTargets
#169
jmillanacosta
opened
2 days ago
0
Preserve MoA field from source OpenTargets
#168
jmillanacosta
opened
2 days ago
0
generator debugging
#167
tabbassidaloii
opened
1 week ago
0
Update rdf branch to main
#166
jmillanacosta
closed
1 week ago
0
nan node fix
#165
tabbassidaloii
closed
1 week ago
1
generator bug fix
#164
tabbassidaloii
closed
1 week ago
0
debug generator
#163
tabbassidaloii
closed
2 weeks ago
0
Pcs usecase upadets
#162
tabbassidaloii
closed
2 weeks ago
0
harmonize all variables
#161
tabbassidaloii
closed
2 weeks ago
0
Usecase 2
#160
YojanaGadiya
opened
2 weeks ago
0
Added RDF module
#159
jmillanacosta
opened
3 weeks ago
0
fix pubchem issue
#158
YojanaGadiya
closed
3 weeks ago
0
add opentargets cmpd-disease function
#157
YojanaGadiya
closed
3 weeks ago
0
Update generator
#156
tabbassidaloii
closed
2 weeks ago
1
Update PCS_usecase.ipynb
#155
tabbassidaloii
closed
2 weeks ago
1
Common id annotator
#154
tabbassidaloii
closed
3 weeks ago
0
MolMeDB, output dic with repeated values
#153
tabbassidaloii
closed
3 weeks ago
1
Query size for PubChem
#152
tabbassidaloii
closed
3 weeks ago
1
Fix empty df bug andadd codes to check intermediate_df
#151
tabbassidaloii
closed
4 weeks ago
1
Fix opentargets functions and test
#150
YojanaGadiya
closed
1 month ago
0
fix disgenet test bug
#149
tabbassidaloii
closed
1 month ago
0
downgrade numpy version
#148
tabbassidaloii
closed
1 month ago
0
update disgenet and fix molmedb
#147
YojanaGadiya
closed
1 month ago
0
MolMeDb, compound and gene interaction output
#146
tabbassidaloii
closed
1 month ago
1
MolMeDb, uniprot id in the output
#145
tabbassidaloii
closed
1 month ago
3
disgenet: SPARQL to API
#144
tabbassidaloii
closed
1 month ago
0
Fix rdf population
#143
jmillanacosta
closed
1 month ago
0
DisGeNet SPARQL endpoint is gone and replaced with an API
#142
tabbassidaloii
closed
1 month ago
2
rdf conversion scripts
#141
YojanaGadiya
closed
3 weeks ago
3
Bug: StringDB and PubChem give rows with NA
#140
tabbassidaloii
closed
1 month ago
0
add contribution guidance
#139
tabbassidaloii
opened
2 months ago
0
Update gene_to_graph_workflow.ipynb
#138
tabbassidaloii
closed
2 months ago
0
Add merge_node function for nodes with same label
#137
ammar257ammar
closed
1 month ago
2
Example fix
#136
tabbassidaloii
closed
3 months ago
0
Adding new resource Pharos
#135
YojanaGadiya
opened
4 months ago
0
Integrating with transcriptomics efforts
#134
YojanaGadiya
opened
4 months ago
0
update generator
#133
tabbassidaloii
closed
2 weeks ago
1
report on inputr with no ID mapping
#132
tabbassidaloii
opened
4 months ago
0
test fixes and annotators
#131
YojanaGadiya
closed
1 month ago
5
pykeen
#130
tabbassidaloii
opened
5 months ago
1
Fix Bgee anotator
#129
tabbassidaloii
closed
1 month ago
1
fix molmedb error
#128
YojanaGadiya
closed
5 months ago
0
There was a bug related to the gene_node_label
#127
adriaque
closed
4 months ago
2
there was a problem importing the graphml file,
#126
adriaque
closed
5 months ago
1
Generator
#125
tabbassidaloii
closed
5 months ago
1
updated Bgee annotator to query for gene expression separately per ge…
#124
dssib
closed
5 months ago
1
Adding drugbank_id and side effects for drugs in the annotator
#123
adriaque
closed
5 months ago
0
This new version takes ENSEMBL IDs instead of symbol
#122
adriaque
closed
5 months ago
1
fix annotators
#121
tabbassidaloii
closed
5 months ago
0
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