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BioJulia
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BioAlignments.jl
Sequence alignment tools
MIT License
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Release/v1.0.1
#39
CiaranOMara
closed
4 years ago
6
Fix SAM.alignlength(record::Record)::Int
#38
herbstk
closed
4 years ago
10
Incorrect calculation of alignment length in SAM.alignlength()
#37
herbstk
closed
4 years ago
1
@info instead of info
#36
tanhevg
closed
4 years ago
0
Registering BioAlignments.jl to BioRegistry?
#35
bicycle1885
closed
4 years ago
6
Update CI
#34
CiaranOMara
closed
5 years ago
1
improve BAM.quality performance
#33
jonathanBieler
closed
3 years ago
1
Sequence logo plots
#31
cossio
opened
5 years ago
1
Can't compiled by PackageCompile
#30
aqzas
opened
5 years ago
0
Fix reading BAM files from processes.
#29
dcjones
closed
5 years ago
7
find() instead of findall() in hts-files.md
#28
aalexandersson
opened
5 years ago
0
LocalAlignment find lower score than biopython/scikit-bio implementations
#27
diegozea
opened
5 years ago
5
Fix haskey(x::BAM.Record, y::String) (issue #20)
#24
jakobnissen
closed
5 years ago
6
:bug: Update covert(BAM.Record x::Vector{UInt8} to Julia v. 1.0
#23
jakobnissen
closed
5 years ago
2
Base.convert(BAM.Record, x::Vector{UInt8}) not updated to Julia v 1.0
#22
jakobnissen
closed
5 years ago
1
Cap Documenter.jl to 0.19 on Travis
#21
mortenpi
closed
5 years ago
1
Bug in extracting auxiliary data fields from BAM file
#20
jakobnissen
closed
5 years ago
1
Julia 1.0 support
#18
dcjones
closed
6 years ago
11
Version trouble with IntervalTrees. Only able to install "BioAlignments" after removing package "Bio"
#17
kopperud
opened
6 years ago
1
Support the mpileup format
#16
TransGirlCodes
opened
6 years ago
0
Fix deprecations
#15
femtocleaner[bot]
closed
6 years ago
1
Add flag test for alignment to the positive strand
#14
phaverty
closed
6 years ago
3
Support for >65535 CIGAR op-codes in BAM files
#13
TransGirlCodes
closed
6 years ago
1
New BAM files can support more than 65535 cigar opcodes
#12
ghuls
closed
6 years ago
2
Contributing files rollout
#11
TransGirlCodes
closed
6 years ago
1
How does one access the strand information?
#9
phaverty
closed
6 years ago
5
use where clause for type parameters
#7
bicycle1885
closed
7 years ago
1
Update docs
#6
bicycle1885
closed
7 years ago
2
Adjust some dependency lower bounds
#5
tkelman
closed
7 years ago
4
WIP: Make BAM readers distributable
#4
bicycle1885
opened
7 years ago
5
Drop support of Julia 0.5
#3
bicycle1885
closed
7 years ago
4
fix appveyor.yml
#2
bicycle1885
closed
7 years ago
1
support Julia v0.6
#1
bicycle1885
closed
7 years ago
1
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