This repository contains material for the Bioconductor annual conference. View the conference web site.

Edit or add material as markdown files in the docs/ directory. Please wrap lines to 80 character width and aim for simple markdown rather than elaborate html or other content.

Please follow best practices by previewing changes locally.

1. Make sure that ruby and bundler are installed, following the 'Requirements' section of GitHub's documentation.

2. Clone the repository and switch to the docs/ directory

   cd BioC2020/docs

3. Install or update bundler to install the ruby pre-requisities.

   gem install --user-install bundler # this will require to export the PATH to run the other commands
   gem install  bundler # needs sudo

4. Install ruby pre-requisites.

   bundle config set path 'vendor/bundle'  # once only, use instead of the --path flag
   bundle install --path vendor/bundle     # once only; references Gemfile
   # If the installer complains, add the suggested $PATH_TO_RUBY/bin
   # $HOME/.gem/ruby/2.3.0/bin/bundle
   # directory to your ~/.bash_profile or ~/.bashrc or similar.

5. Execute the jekyll server

   bundle exec jekyll serve

   and view the results at https://localhost:4000