tradeSeq - Githubissues

koenvandenberge commented 5 years ago

Update the following URL to point to the GitHub repository of the package you wish to submit to Bioconductor

Repository: https://github.com/statOmics/tradeSeq

Confirm the following by editing each check box to '[x]'

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bioc-issue-bot commented 5 years ago

Received a valid push; starting a build. Commits are:

dbe6f15 allow for custom legend position in plotSmoothers

bioc-issue-bot commented 5 years ago

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bioc-issue-bot commented 5 years ago

Received a valid push; starting a build. Commits are:

f0582de update README installation

bioc-issue-bot commented 5 years ago

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bioc-issue-bot commented 5 years ago

Received a valid push; starting a build. Commits are:

818b3ef default knots set to 6

bioc-issue-bot commented 5 years ago

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bioc-issue-bot commented 5 years ago

Received a valid push; starting a build. Commits are:

7ab293b forgot version bump with new plotting methods

bioc-issue-bot commented 5 years ago

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bioc-issue-bot commented 5 years ago

Received a valid push; starting a build. Commits are:

d942056 name for fitGam to create rd file (fixes several w...

bioc-issue-bot commented 5 years ago

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bioc-issue-bot commented 5 years ago

Received a valid push; starting a build. Commits are:

13d45e7 fixed two errors and three warnings from the build

bioc-issue-bot commented 5 years ago

Received a valid push; starting a build. Commits are:

b3cf270 Update DESCRIPTION

bioc-issue-bot commented 5 years ago

Dear Package contributor,

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Your package has been built on Linux, Mac, and Windows.

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bioc-issue-bot commented 5 years ago

Dear Package contributor,

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bioc-issue-bot commented 5 years ago

Received a valid push; starting a build. Commits are:

58bf94f Update DESCRIPTION

bioc-issue-bot commented 5 years ago

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bioc-issue-bot commented 5 years ago

Received a valid push; starting a build. Commits are:

f51bd4b allow custom family 01c5658 version bump

bioc-issue-bot commented 5 years ago

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bioc-issue-bot commented 5 years ago

Received a valid push; starting a build. Commits are:

ec4e5e6 less arguments in plotGeneCount

bioc-issue-bot commented 5 years ago

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bioc-issue-bot commented 5 years ago

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bioc-issue-bot commented 5 years ago

Received a valid push; starting a build. Commits are:

115233f no longer relies on plyr

bioc-issue-bot commented 5 years ago

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bioc-issue-bot commented 5 years ago

Received a valid push; starting a build. Commits are:

c39357a typo fixed

bioc-issue-bot commented 5 years ago

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bioc-issue-bot commented 5 years ago

Received a valid push; starting a build. Commits are:

7fac0b7 fixed typo

bioc-issue-bot commented 5 years ago

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bioc-issue-bot commented 5 years ago

Received a valid push; starting a build. Commits are:

55e6267 version bump

bioc-issue-bot commented 5 years ago

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bioc-issue-bot commented 5 years ago

Received a valid push; starting a build. Commits are:

876a775 version bump ; major overhaul to SCE finished

bioc-issue-bot commented 5 years ago

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bioc-issue-bot commented 5 years ago

Received a valid push; starting a build. Commits are:

7c30e6f add startup message about SCE overhaul

bioc-issue-bot commented 5 years ago

Received a valid push; starting a build. Commits are:

a3e38b3 rm plyr from NAMESPACE

bioc-issue-bot commented 5 years ago

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bioc-issue-bot commented 5 years ago

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bioc-issue-bot commented 5 years ago

Received a valid push; starting a build. Commits are:

3e3f7ec version bump

bioc-issue-bot commented 5 years ago

Received a valid push; starting a build. Commits are:

a1de847 define id in clusterExpressionPatterns

bioc-issue-bot commented 5 years ago

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bioc-issue-bot commented 5 years ago

Received a valid push; starting a build. Commits are:

ccfe6e0 version bump

bioc-issue-bot commented 5 years ago

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bioc-issue-bot commented 5 years ago

Received a valid push; starting a build. Commits are:

b8a242e updated website after merging sce

bioc-issue-bot commented 5 years ago

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Your package has been built on Linux, Mac, and Windows.

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koenvandenberge commented 5 years ago

Hi @Kayla-Morrell

We have just finished a major overhaul of the package. It would be great to get your feedback. Our only remaining ERROR label relates to the size of the tarball of the package.

Thank you in advance, Best, Koen

Kayla-Morrell commented 5 years ago

Hello @koenvandenberge,

You must address WARNINGS as well. One suggestion I can make for the size of the tarball has to do with the vignette directory. This directory should only include the vignette file, the bib file, and any necessary static images. The html file is taking up 8.26MB worth of space in the repository, please remove this file as it is not needed.

Best, Kayla

bioc-issue-bot commented 5 years ago

Received a valid push; starting a build. Commits are:

5eeb02f :wq :q 46155d0 version bump, rm vignette HTML

bioc-issue-bot commented 5 years ago

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bioc-issue-bot commented 5 years ago

Received a valid push; starting a build. Commits are:

be2522c fix vignette: should have been 200 genes to cluste...

bioc-issue-bot commented 5 years ago

Dear Package contributor,

This is the automated single package builder at bioconductor.org.

Your package has been built on Linux, Mac, and Windows.

On one or more platforms, the build results were: "WARNINGS, ERROR". This may mean there is a problem with the package that you need to fix. Or it may mean that there is a problem with the build system itself.

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bioc-issue-bot commented 5 years ago

Received a valid push; starting a build. Commits are:

5851cc6 fix bug in pairwise earlyDETest; update R dependen...

Bioconductor / Contributions

tradeSeq #1157