Closed koenvandenberge closed 5 years ago
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433c80d fix earlyDETest, #14
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cd20f5c fixed warnings on the splinfun function
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74256ae bug in vignette
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5796673 Update DESCRIPTION
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56a4ace simplify code to return pairwise diffEndTest resul...
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bfad492 update docs
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5917791 better way to have a smaller vignette
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b58e1de removed accent on my name, see if that create an i...
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4a6a717 fitGAM returns NA if mgcv gam did not fit
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a371074 better checking whether mgcv fitting failed
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eacf58b pairwise diffEndTest now also returns logFC
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697a7b8 set Wald stat to 0 if FC threshold not met
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fc189c0 stop tracking .DS_Store
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Dear @Kayla-Morrell
We have now fixed all errors and warnings, except for one warning, which is related to our usage of set.seed
in the code. We require this for reproducibility purposes, since we perform a multinomial sampling to assign cells to lineages in a trajectory. Note, that the seed can be passed as an argument to the fitGAM
function, hence it is not hard coded in the package.
It would be great to get feedback concerning the submission of tradeSeq to Bioconductor.
Best, Koen
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abefe3a add SD to authors
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5f71651 few more pkg tests
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